Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., protein-export membrane protein SecF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  197 bits (501), Expect = 3e-55
 Identities = 122/353 (34%), Positives = 189/353 (53%), Gaps = 50/353 (14%)

Query: 5   LKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKW-LNWGLDFTGGTLIEVGFEQPANLE 63
           +K D  IDF+   + A+ LS+V+I     +++    L +G+DF GG +++V F++P   E
Sbjct: 6   IKYDTKIDFVGMRRIAYVLSIVVILIGFASIAMNGGLRYGIDFAGGAVVQVKFDKPVEDE 65

Query: 64  QIRSALEAKGFGDATVQNFGSA-RDVMVRLRPRDDMAGEALGNQILAAIKEGTGG-NVEM 121
            I+ +L        ++Q FG    D ++R+      A +++   +  A+++     +  +
Sbjct: 66  AIKKSLADADLPGLSIQRFGEGDEDYLIRISDTGSSA-DSIRQTVSTALQQNLKDVSFTV 124

Query: 122 RRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFE---------------------- 159
           +R+E VGP VG +L      A+  ++L I +Y+S RFE                      
Sbjct: 125 QRLEMVGPKVGADLRSKAVEALYYAVLLIAVYISGRFEQRWMASAVMAATLWGGMYLLSA 184

Query: 160 --------------------WRL----AAGAVLALAHDVIITLGIFSILQIEVDLTIVAA 195
                               W+L    A GA++AL HDV+I++G+ S+L  E DL I+AA
Sbjct: 185 IGLGREWLVFVSLLVTVALCWKLKLNFALGAIIALLHDVLISIGLLSLLGKEFDLNIIAA 244

Query: 196 LLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLITSGTTLFVVIAL 255
           LLT++GYSLNDTI+V+DRIRE  R    +    I+N SI QTLSRT++T GTTL V+++L
Sbjct: 245 LLTLIGYSLNDTIIVYDRIRETLRTNPDDPFDVIINRSINQTLSRTILTGGTTLMVIVSL 304

Query: 256 FTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLLPPQVEKEG 308
           F  GG +IH FAL +  G+ +GT SSI+VAS + L  G      +    EK G
Sbjct: 305 FFLGGGVIHDFALTMFFGVFIGTLSSIFVASPVLLAFGKPVMAAVDADYEKPG 357