Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score =  374 bits (959), Expect = e-108
 Identities = 185/314 (58%), Positives = 244/314 (77%), Gaps = 1/314 (0%)

Query: 1   MFQILKADKMIDFMRWSKFAFALSLVMIAASIFTLSTKWLNWGLDFTGGTLIEVGFEQPA 60
           M +IL   + ++F+R +     +S +++  S+ +L+TK +NWGLDFTGGT++E+ F QP 
Sbjct: 1   MLEILSLKRTVNFLRHALPISIMSAILVFGSLVSLATKGINWGLDFTGGTVVEMEFTQPV 60

Query: 61  NLEQIRSALEAKGFGDATVQNFGSARDVMVRLRPRDDMAGEALGNQILAAIKEGTGGNVE 120
           +L  +R+ L A     A VQNFGS+RDV+VRL  ++ ++ +     ++AA ++   G V+
Sbjct: 61  DLNVLRTKLSAPELDGAVVQNFGSSRDVLVRLSVKEGVSSDVQVKSVMAAAQQVDAG-VQ 119

Query: 121 MRRIEFVGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGI 180
            +R+EFVGP VG EL E GGLA+LV+L+CI++YVS RFEWRLA G+V ALAHDVI+TLG+
Sbjct: 120 QKRVEFVGPQVGKELAEQGGLAVLVALICIMIYVSFRFEWRLAFGSVAALAHDVIVTLGV 179

Query: 181 FSILQIEVDLTIVAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSR 240
           FS+ Q+E DLT++A +LTVVGYSLNDTIVVFDRIRENF KMRK EP E++N SITQT+SR
Sbjct: 180 FSVFQLEFDLTVLAGVLTVVGYSLNDTIVVFDRIRENFLKMRKSEPEEVVNVSITQTMSR 239

Query: 241 TLITSGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASALALKLGITREHLL 300
           T+IT+GTTL  V+ALF +GG MIHGFA ALLLGI VGTYSSIYVAS LA+KLGI REH++
Sbjct: 240 TIITTGTTLVTVVALFLKGGTMIHGFATALLLGIFVGTYSSIYVASYLAIKLGICREHMM 299

Query: 301 PPQVEKEGAELDEM 314
           P +VEKEGA+   M
Sbjct: 300 PVEVEKEGADQPSM 313