Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., preprotein translocase subunit SecD (RefSeq) from Shewanella sp. ANA-3

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 43/164 (26%), Positives = 87/164 (53%), Gaps = 6/164 (3%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           +GP++G E  E+G  A++  +  +L+++ V +       A LAL  ++++ +G+ S++  
Sbjct: 442 IGPSLGAENIESGVQAMIWGMAVVLIFMLVYYR-SFGLIANLALTANLVMVVGVMSMIPG 500

Query: 187 EVDLTI--VAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLIT 244
            V LT+  +A ++  VG +++  +++++RIRE  R  R  + A  ++       S     
Sbjct: 501 AV-LTLPGIAGMVLTVGMAVDGNVLIYERIREELRAGRSVQQA--IHEGYGNAFSTIADA 557

Query: 245 SGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           + TT    + LF  G   I GFA+ L++GI    +++I    A+
Sbjct: 558 NITTFLTALILFAVGTGAIKGFAVTLMIGIATSMFTAIVGTRAI 601