Pairwise Alignments

Query, 315 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., preprotein translocase subunit SecD (RefSeq) from Shewanella sp. ANA-3

 Score = 64.3 bits (155), Expect = 7e-15
 Identities = 43/164 (26%), Positives = 89/164 (54%), Gaps = 6/164 (3%)

Query: 127 VGPNVGDELTEAGGLAILVSLLCILLYVSVRFEWRLAAGAVLALAHDVIITLGIFSILQI 186
           +GP +G E  + G  A+ + +   LL++++ +  RL   A +AL  +++I  G+ +++  
Sbjct: 450 IGPTLGAENIQNGFAALGLGMGITLLFMALWYR-RLGWVANVALIANMVILFGLLALIPG 508

Query: 187 EVDLTI--VAALLTVVGYSLNDTIVVFDRIRENFRKMRKEEPAEIMNSSITQTLSRTLIT 244
            V LT+  +A L+  VG +++  +++F+RI++  ++ R    A  +++      S     
Sbjct: 509 AV-LTLPGIAGLVLTVGMAVDTNVLIFERIKDKLKEGRSFALA--IDTGFDSAFSTIFDA 565

Query: 245 SGTTLFVVIALFTQGGAMIHGFALALLLGITVGTYSSIYVASAL 288
           + TT+   + L++ G   I GFAL L LG+    ++ I+ + AL
Sbjct: 566 NFTTMITAVVLYSIGNGPIQGFALTLGLGLLTSMFTGIFASRAL 609