Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 63.9 bits (154), Expect = 9e-15
 Identities = 37/186 (19%), Positives = 90/186 (48%), Gaps = 4/186 (2%)

Query: 414 DSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLY 473
           + P   H +A  L+      P  +     +GP +G++  D G    +  +  ++++    
Sbjct: 89  EDPQLGHQVAEALQKAGGDNPAQVKRVEFVGPQVGEELRDQGGLGMLMALGGILIYLAFR 148

Query: 474 YR-KFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIRE 532
           ++ KF + A ++L+ ++++ +G++S     T  L  +A ++  +G +++  +++F+R+RE
Sbjct: 149 FQWKFAVGAIVSLIHDVIVTVGILSFFQ-ITFDLTVLAAVLAIIGYSLNDTIVVFDRVRE 207

Query: 533 ELREGKNPQ--QAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILT 590
             R  +     + I+             +I+TL+    L   G   + GF++ L +G+L 
Sbjct: 208 NFRVLRKASLIENINISTTQTLLRTMATSISTLLAIAALLIFGGDNLFGFSIALFVGVLA 267

Query: 591 SMFTAI 596
             +++I
Sbjct: 268 GTYSSI 273