Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 844 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  301 bits (772), Expect = 6e-86
 Identities = 191/526 (36%), Positives = 302/526 (57%), Gaps = 43/526 (8%)

Query: 109 TPYWLESIGAA----PMKLGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIR 164
           TP   E + +     P+ LGLDLRGG H ++EVD     +  ++   +  R  LR E++ 
Sbjct: 28  TPAMREQVASVLPFEPVTLGLDLRGGSHLVLEVDGAGLQKARLNSLLDDTRRVLRGERVS 87

Query: 165 YRAIRPLSDAVEVTLRDAEQLAQTKLLLESKHRDMTFT-----------TSESDGRFVLV 213
             + R   ++V V++ DA+   +    L+     ++             T+  D   V+ 
Sbjct: 88  ASSARISGNSVTVSIPDAQDRDKVLPKLQELATPVSTVGFAAPAPEVEVTTAGD---VIT 144

Query: 214 AKFTEARLQEIRNYAVEQNITILRNRVNELGVAEPLVQRQGATRIVVELPGVQDTARAKE 273
              TEA L +    AVEQ++ I+RNRV+++GVAEPL+QR G+ RI+V+LPG+QD  R +E
Sbjct: 145 LAMTEAGLADRMTKAVEQSLEIIRNRVDQVGVAEPLIQRIGSNRILVQLPGLQDPTRLRE 204

Query: 274 ILGATATLEFREVDDKADLAAAAAGRAPAGSEIKFDRN-GRPVVLKKRVILGGSSITDAS 332
           +LG+TA + F  +D   D+   A    P G +I    N G    ++ RV + G  + DA 
Sbjct: 205 LLGSTAQMSFHMLDQSVDVTQPA----PRGVDILPGANDGNRYPVESRVAISGERLDDAK 260

Query: 333 SSADEY-GRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGKRSPEGKVILTKH 391
              D+   +P V+ S DS G  + +  +++N+G+  A V            +GKV+    
Sbjct: 261 VGFDQRTNQPVVDFSFDSLGARQFADITRENVGRPFAIVL-----------DGKVLTAP- 308

Query: 392 EEVINQATIQSALGRNFRITGIDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQN 451
             VIN+      LG   +I+G  +  EA  L+ LLR+GAL AP++I+EER++GP++G  +
Sbjct: 309 --VINEPI----LGGRGQISGSFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGSDS 362

Query: 452 IDMGIQACIWGMVAVMLFTVLYYRKFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAG 511
           I MG+   + G   V++  V+ Y  +GMIAN+ L+ + ++ IGV+ +I G+T+TLPGIAG
Sbjct: 363 IRMGLFTGLAGFGLVVVLMVVLYGAWGMIANVGLVLHTIMTIGVLGLI-GSTLTLPGIAG 421

Query: 512 IVLTVGMAVDANVLIFERIREELREGKNPQQAIHQGYANAFSTIADANITTLITAIILFA 571
           I+L +GMAVDAN+LI  RIREE   G    +A+  G+  A++TI D+N+TTL   ++LF 
Sbjct: 422 IILGIGMAVDANILINARIREETEAGAGAMKALDIGFNKAYATIIDSNVTTLAGTVLLFW 481

Query: 572 VGTGAIKGFAVTLSIGILTSMFTAIVGTRCIVNLLYGGKRINKLSI 617
            G+G +KGFAVT+ +GI  SMFT++   R ++  +   +++ KL I
Sbjct: 482 FGSGPVKGFAVTMMLGIGISMFTSVTVVRLLMREVVVRRKMKKLEI 527