Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., protein-export membrane protein SecF (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.9 bits (172), Expect = 7e-17
 Identities = 50/187 (26%), Positives = 101/187 (54%), Gaps = 6/187 (3%)

Query: 418 EAHNLALLLRAGALIAP-ISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYR- 475
           +AH LA   ++   + P + +++  ++ P +GQ+  + G  A +  M+ ++ +  L +  
Sbjct: 89  DAHTLADFNQSLLQLDPTMQVLDRDSVSPQVGQELFEQGGLALLIAMLCILGYLSLRFEW 148

Query: 476 KFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREEL- 534
           +    A +AL+ ++VL++GV ++  G    L  +A ++  +G +++ +++I +RIRE L 
Sbjct: 149 RLAAGALVALVHDVVLVLGVFALT-GMEFNLTVLAAVLAVLGYSLNDSIIIADRIRELLL 207

Query: 535 -REGKNPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMF 593
            R      +         FS     + TTLIT   L+ +G   ++GFAV + +GI+T  F
Sbjct: 208 ARPKSRLTEVNDAAIVQTFSRTMVTSGTTLITVGALWLLGGAPLEGFAVAMFVGIVTGTF 267

Query: 594 TAI-VGT 599
           +++ VGT
Sbjct: 268 SSVSVGT 274