Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella loihica PV-4

 Score = 70.9 bits (172), Expect = 8e-17
 Identities = 46/180 (25%), Positives = 94/180 (52%), Gaps = 7/180 (3%)

Query: 422 LALLLRAGALIAP-ISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVLYYRKFGMI 480
           +A ++ A A + P +S      +GP +G++  + G  A +  ++ ++++    +     +
Sbjct: 104 VAHVMEAAAKVDPGVSQKRVEFVGPQVGKELAEQGGLAVLVALICILIYVSFRFEWRLAL 163

Query: 481 ANIALMANLVLI-IGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIRE---ELRE 536
            ++A +A+ V+I +GV S+       L  +AG++  VG +++  +++F+RIRE   ++R+
Sbjct: 164 GSVAALAHDVIITLGVFSLFQ-LEFDLTVLAGVLTVVGYSLNDTIVVFDRIRENFLKMRK 222

Query: 537 GKNPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAI 596
           G  P++ ++       S       TTL+  + LF  G   I GFA  L +GI    F++I
Sbjct: 223 G-TPEEVVNNSITQTMSRTIITTGTTLVVVVALFLKGGTMIHGFATALLMGIFVGTFSSI 281