Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., protein-export membrane protein, SecD/SecF family from Dechlorosoma suillum PS

 Score =  531 bits (1368), Expect = e-155
 Identities = 287/626 (45%), Positives = 409/626 (65%), Gaps = 26/626 (4%)

Query: 2   LNRYPLWKYLMVMLTIAVAALYALPNIYGEDPAIQITGARGA-SVDMSTLDAVTDALNKA 60
           +NRYPLWKY+ V++ + +  LY LPN +GE PA+Q++ AR     D   L  V  AL  A
Sbjct: 1   MNRYPLWKYITVVVALVIGFLYTLPNFFGEAPAVQLSPARATLKTDAQLLSRVEAALQGA 60

Query: 61  QLSQKSIALENGSILVRFNDTDTQISARDIISEALGKDK-----IVALNLAPSTPYWLES 115
            +S   I L++  +  RF DTDTQ+  +D++ +    +      +VALNL  S+P WL +
Sbjct: 61  GISHDGIFLDSNGVKTRFKDTDTQLKVKDLLEKTFNPNPQDAQYVVALNLLSSSPKWLSN 120

Query: 116 IGAAPMKLGLDLRGGVHFLMEVDMDAAMEKLVSQQEEAFRSDLRDEKIRYRAIRPLSDAV 175
           +GA PM LGLDLRGGVHFL++VDM  A+ K +       R+ LRD+ +R+  I    +AV
Sbjct: 121 LGALPMYLGLDLRGGVHFLLQVDMAGALTKRLDSMSADLRTLLRDKNLRHAGINREGNAV 180

Query: 176 EVTLRDAEQLAQTKLLLESKHRDMTFTTSESDGRFVLVAKFTEARLQEIRNYAVEQNITI 235
            V  RDA+   + +++LE    D+TF   +      L A      ++ I+++A++QNIT 
Sbjct: 181 VVKFRDADTRTKARIVLEDNQPDLTFVDGQDGSDLKLTASLKPTAVKRIQDFALKQNITT 240

Query: 236 LRNRVNELGVAEPLVQRQGATRIVVELPGVQDTARAKEILGATATLEFREVDD-KADLAA 294
           L NR+NELGVAEP++Q+QGA RIVV+LPGVQDTA+AK+ILG TATLE R VDD    L A
Sbjct: 241 LHNRINELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDILGRTATLEIRMVDDTPGALEA 300

Query: 295 AAAGRAPAGSEIKFDRNGRPVVLKKRVILGGSSITDASSSAD-EYGRPQVNISLDSEGGN 353
           A AG+AP G+E+  +R G P+++KK+V+L G  +TDA    D +   P V+++LDS G  
Sbjct: 301 AMAGQAPFGTELYSERGGSPLLVKKQVVLTGDRLTDAQPGFDGQTHEPAVHLTLDSAGAR 360

Query: 354 KMSAFSKKNIGKLMATVFAEYKDSGKRSPEGKVILTKHEEVINQATIQSAL-GRNFRITG 412
                +++N+GK MA +  E         +GK       EV+    I++ + G   +I+G
Sbjct: 361 IFKDITRENVGKRMAILLIE---------KGK------GEVVTAPVIRTEIGGGRVQISG 405

Query: 413 IDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTVL 472
             S  EA++ ALLLRAG+L AP+ IVEERTIGPS+G  NI  G  + +WG +A+  F + 
Sbjct: 406 KMSTMEANDTALLLRAGSLAAPMDIVEERTIGPSLGADNISKGFHSTLWGFLAIAAFMMC 465

Query: 473 YYRKFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIRE 532
           YY  FG+I+ +AL ANL+ ++ ++S++  AT+TLPGIA I LT+GMA+D+NVLI ER+RE
Sbjct: 466 YYLMFGLISTLALAANLMFLVALLSLMQ-ATLTLPGIAAIALTLGMAIDSNVLINERVRE 524

Query: 533 ELREGKNPQQAIHQGYANAFSTIADANITTLITAIILFAVGTGAIKGFAVTLSIGILTSM 592
           ELR G +PQ AI  GY  AF TI D+N+TTLI  + L A G+G I+GFAV   +GILTSM
Sbjct: 525 ELRNGASPQAAISAGYERAFGTILDSNVTTLIAGVALLAFGSGPIRGFAVVHCLGILTSM 584

Query: 593 FTAIVGTRCIVNLLYG-GKRINKLSI 617
           F+++V +R +VNL+YG  K+++K+SI
Sbjct: 585 FSSVVVSRALVNLIYGRRKKLDKVSI 610