Pairwise Alignments

Query, 617 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., preprotein translocase subunit SecF from Burkholderia phytofirmans PsJN

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 45/207 (21%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 393 EVINQATIQSALGRNFRITGIDSPAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNI 452
           +V N  T +  L R     G  S  ++  +   L+A      +  VE   +GP +G++  
Sbjct: 77  QVQNFGTSRDVLIRLPLKQGYTSAQQSDQVMTALKAETPQVQLQRVE--FVGPQVGKELA 134

Query: 453 DMGIQACIWGMVAVMLFTVLYYR-KFGMIANIALMANLVLIIGVMSMIPGATMTLPGIAG 511
             G+ A    +V ++++    +  K+ +   IA + ++++I+G  +       +L  +A 
Sbjct: 135 TDGLLALACVVVGIVIYLSFRFEWKYAVAGVIANLHDVIIILGFFAFFQWE-FSLSVLAA 193

Query: 512 IVLTVGMAVDANVLIFERIREELREGKNPQ--QAIHQGYANAFSTIADANITTLITAIIL 569
           ++  +G +V+ +V+IF+RIRE  R  +     + I+    +  S     +  T +  + +
Sbjct: 194 VLAVLGYSVNESVVIFDRIRETFRRERKLTVIEVINHAITSTMSRTIITHGCTQMMVLSM 253

Query: 570 FAVGTGAIKGFAVTLSIGILTSMFTAI 596
           F  G   +  FA+ L++GIL  +++++
Sbjct: 254 FLFGGPTLHYFALALTVGILFGIYSSV 280