Pairwise Alignments

Query, 169 a.a., acetoin utilization protein AcuB from Vibrio cholerae E7946 ATCC 55056

Subject, 172 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.6 bits (205), Expect = 2e-21
 Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 4/154 (2%)

Query: 8   PGSDGSLRRKELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIV-DANKKLL 66
           P S+ S+ +K +  +KV D+M+     +    +L DA HLM+   +RH+P++ + +  L+
Sbjct: 18  PESNQSIVKKGIYRMKVSDIMSTEVICISDGASLKDAHHLMQTRGVRHLPVISETDGALV 77

Query: 67  GIVSQRDLLAAQESSLQRSAQG--DSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKH 124
           G+++ + ++A+  S L +  QG  D     TP+  VM  D  S+ P   L     Y   +
Sbjct: 78  GVLTHKKMIASVLSMLNKYGQGALDRKERYTPIATVMDKDCQSLTPNEPLSTVVEYFIDN 137

Query: 125 KIGCLPVVAKD-VLVGIITDSDFVTIAINLLELQ 157
           K+GCLPVV  +  ++GI+T SDF+ +   LL+ Q
Sbjct: 138 KLGCLPVVDNNKKVLGIVTSSDFIKLCRTLLQQQ 171



 Score = 32.3 bits (72), Expect = 4e-06
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 12  GSLRRKELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQ 71
           G+L RKE     +  +M +   +L     L+          +  +P+VD NKK+LGIV+ 
Sbjct: 99  GALDRKE-RYTPIATVMDKDCQSLTPNEPLSTVVEYFIDNKLGCLPVVDNNKKVLGIVTS 157

Query: 72  RDLLAAQESSLQRSA 86
            D +    + LQ+ A
Sbjct: 158 SDFIKLCRTLLQQQA 172