Pairwise Alignments

Query, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  328 bits (840), Expect = 1e-94
 Identities = 170/301 (56%), Positives = 214/301 (71%), Gaps = 3/301 (0%)

Query: 1   MNKWPSLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSP 60
           M   PSLK L YLV LY+ ++F+ AA+ C VSQSTLS GIQNLEE +G  L E+  K   
Sbjct: 1   MKHLPSLKNLYYLVNLYQEQNFNRAAKLCHVSQSTLSSGIQNLEEQLGHQLIERDHKS-- 58

Query: 61  LVFTRVGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEI 120
            +FT +GE VV++ R+LL    DLVEL K  QG  M G +RLGCIPTIAPFLL  +V+  
Sbjct: 59  FIFTAIGEEVVQRSRKLLTDVDDLVELVKH-QGQPMTGDIRLGCIPTIAPFLLSRVVKHC 117

Query: 121 NQRYPKLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQ 180
            Q YP+L L L+EDTT  LL AL  GELD+L+LALP D     S  VG DPF++V+ +  
Sbjct: 118 QQEYPELTLFLKEDTTERLLDALGKGELDLLLLALPADTSGYHSMKVGIDPFKLVMHKEL 177

Query: 181 VNQIRVPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVAN 240
            +++  PI Y  LPDES+FLL++EHC+T HA+SAC L D +KINPF ATSLHTLVQMV +
Sbjct: 178 SSEVHQPIDYKALPDESIFLLQSEHCITGHAISACSLADSDKINPFAATSLHTLVQMVNS 237

Query: 241 GLGTTFIPQMAIDHGLLDNQNLVVIDPPGQKAYREIGLVWRPSSSRIHTFRQLAEIVAEL 300
            LGTTF+PQMAID G+L++ +L  + PPG+  YR+IGLVWR +SSRI TFR L + +  L
Sbjct: 238 KLGTTFLPQMAIDAGILNDTDLTALTPPGEAPYRDIGLVWRQTSSRIMTFRTLGKAIQSL 297

Query: 301 L 301
           L
Sbjct: 298 L 298