Pairwise Alignments

Query, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  333 bits (855), Expect = 2e-96
 Identities = 174/301 (57%), Positives = 222/301 (73%), Gaps = 3/301 (0%)

Query: 1   MNKWPSLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSP 60
           M   PSLK L YLV L++ ++F+ AA+ CFVSQSTLS GIQNLEE +G  L E+  K   
Sbjct: 1   MKNLPSLKNLYYLVNLHQEQNFNRAAKVCFVSQSTLSSGIQNLEEQLGHQLIERDHKS-- 58

Query: 61  LVFTRVGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEI 120
            +FT +GE VV++ R++L    DLVEL K  QG+ M G +RLGCIPTIAPFLL  +V++ 
Sbjct: 59  FMFTAIGEEVVQRSRKILTDVDDLVELVKN-QGEPMTGDIRLGCIPTIAPFLLSRVVKQC 117

Query: 121 NQRYPKLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQ 180
            Q YP++ LLL+EDTT  LL AL  GELD+LILALPVD     S  VG DPF+MVI ++ 
Sbjct: 118 QQAYPEMSLLLKEDTTERLLDALGKGELDLLILALPVDTSGYHSMKVGIDPFKMVIHKDL 177

Query: 181 VNQIRVPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVAN 240
           V  I  PI Y  LPDES+FLL++EHC+T HA++AC+L D  K+NPF ATSLHTLVQMV +
Sbjct: 178 VGGIHQPIDYQTLPDESIFLLQSEHCITGHAITACQLGDSAKVNPFAATSLHTLVQMVNS 237

Query: 241 GLGTTFIPQMAIDHGLLDNQNLVVIDPPGQKAYREIGLVWRPSSSRIHTFRQLAEIVAEL 300
            LGTTF+PQMAID G+L++ +LVV+ PPG+  YR+IGLVWR ++SRI TFR L  ++ +L
Sbjct: 238 KLGTTFLPQMAIDAGILNDTDLVVMTPPGEAPYRDIGLVWRQTTSRILTFRTLGLLIQKL 297

Query: 301 L 301
           L
Sbjct: 298 L 298