Pairwise Alignments

Query, 301 a.a., hydrogen peroxide-inducible genes activator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DNA-binding transcriptional regulator OxyR from Klebsiella michiganensis M5al

 Score =  166 bits (421), Expect = 5e-46
 Identities = 106/292 (36%), Positives = 158/292 (54%), Gaps = 4/292 (1%)

Query: 6   SLKQLSYLVTLYETRHFSEAAERCFVSQSTLSKGIQNLEELIGCSLYEKQDKKSPLVFTR 65
           +++ L YLV L E RHF  AA+ C VSQ TLS  I+ LE+ +G  L E+  +K  ++FT+
Sbjct: 2   NIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRK--VLFTQ 59

Query: 66  VGELVVKQGRELLAKGQDLVELGKLCQGDTMEGQLRLGCIPTIAPFLLCDLVQEINQRYP 125
            G L+V Q R +L + + L E+    QG+TM G L +G IPTI P+LL  ++  ++Q +P
Sbjct: 60  AGLLLVDQARTVLREVKVLKEMASQ-QGETMSGPLHIGLIPTIGPYLLPLIIPMLHQTFP 118

Query: 126 KLHLLLREDTTANLLSALRSGELDVLILALPVDIGNMESYVVGQDPFRMVISRNQVNQIR 185
           KL + L E  T  LL+ L SG+LD  ILAL  +        +  +P  + I  +     R
Sbjct: 119 KLEMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMMLAIYEDHPWANR 178

Query: 186 VPIRYADLPDESVFLLENEHCLTEHAVSACKLTDKEKINPFTATSLHTLVQMVANGLGTT 245
             +  +DL  E + +LE+ HCL + A+  C     ++   F ATSL TL  MVA G G T
Sbjct: 179 ECVPMSDLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGIT 238

Query: 246 FIPQMAIDHGLLDNQNLVVIDPPGQKAYREIGLVWRPSSSRIHTFRQLAEIV 297
            +P +A+         +V +     +  R +GLV+RP S     +  LAE +
Sbjct: 239 LLPALAVPQE-RKRDGVVYVPCIKPEPRRTVGLVYRPGSPLRSRYEHLAEAI 289