Pairwise Alignments

Query, 548 a.a., phosphate ABC transporter, permease protein PstA from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., phosphate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  143 bits (360), Expect = 9e-39
 Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 32/266 (12%)

Query: 278 AWRFLSESPRESNSEGGVFPAIFGTVFLVIIMSIIVMPLGVIAAIYLHEYAQE-GAFTRM 336
           +W F++ +        G++  I  TV++V++      P+G++ AIYL EYA       R+
Sbjct: 42  SWEFITGAYTRIGEISGIWAMIVSTVYMVLLSLTFAAPIGIMTAIYLTEYASPVSKVVRV 101

Query: 337 IRVAVINLAGVPSIVYGVFGLGFFVYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAV 396
           IR    +LAG+PSIVYG+FG+ FFV  +G                     +L  ALTLA+
Sbjct: 102 IRFCTESLAGIPSIVYGLFGMTFFVTQLGLGFS-----------------ILSGALTLAM 144

Query: 397 LTLPVVIVATEEGLSRIPISVRHGSLALGATQFETIWRIVLPMASPAIITGLILAIARAA 456
           L LPV+I  TEE L  +P+S R G  ALG ++   IWR++LP A P I+  +IL+  R  
Sbjct: 145 LILPVIIRTTEEALMSVPMSYREGGYALGCSKIYIIWRLILPSALPGIVNSIILSTGRVV 204

Query: 457 GEVAPLMLVGAV--KLASSLPVDGEFPFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVY 514
           GE AP+ L   +  ++  S+   G    +HL +    L        F  N  + A    Y
Sbjct: 205 GESAPVFLTAGMVTQIPESVMDSGRTLTVHLYKLTQEL--------FTQNEWDQA----Y 252

Query: 515 ATSFLLVTVIVALNLTAISIRNNLRE 540
           AT+ +L+ +++ LNL    I   L +
Sbjct: 253 ATATILIVLVLMLNLATKLIATKLNK 278