Pairwise Alignments

Query, 548 a.a., phosphate ABC transporter, permease protein PstA from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., phosphate ABC transporter, permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  604 bits (1557), Expect = e-177
 Identities = 306/552 (55%), Positives = 400/552 (72%), Gaps = 9/552 (1%)

Query: 1   MLNWFKSGAPWIWLTGGAVSVSLIAVLGLLLVIGWRGLTYFWPAPLLQWQTPDGK----T 56
           M  W KSG+PWIW+TGGAVS+SLIAVLGLLL+I WRGL+YFWP  + QW+  D      T
Sbjct: 1   MGKWVKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPTTIYQWELEDSSGVRST 60

Query: 57  VVGQLYARESVPVSHLKEMNLPLPEKVQAAGLATRLNIKVANRDLYGSDFIALLEFETEF 116
           ++G++Y RE VP   L         K       TR  +K  NR+  G DF  +L  +   
Sbjct: 61  LIGEIYDREEVPTERLIAAGQVF--KKDPGEFVTRYLVKTGNREFVGLDFRWILATDIVS 118

Query: 117 KGAPQGWAVIERSRGGQLFGKPLRFDSTTGELDLP---LERHLRQALLEAETIRDQVDKM 173
           +  P   A +ER++ G  +G P+        L+L    +E  L + +  A  + D+  K+
Sbjct: 119 RSEPSEVAKLERAKNGNFYGYPVAVIENGKRLELANDVIEASLMEHIDRAVALSDKALKL 178

Query: 174 VEQQVRVISSQLERLRLEKRRKQLNNQLSDEFLQHYVLSKSRLEKELAQVQTELDALRAP 233
            +Q +  I+ ++ERLRL++R  +L+ +L++     +  +K+ L ++   ++ EL ALR  
Sbjct: 179 QKQDIGAINYEIERLRLKERGYELDGELTESLKAEFAAAKAALHQDYLVLEKELFALREQ 238

Query: 234 LEKQFLYLVDMQGETVSVPLSEILDFWYPNDMNFAQKLAEWGKQAWRFLSESPRESNSEG 293
             +  + + DM+G  V + L  +LD  Y N ++   K+  W     RFL + PRE+N+EG
Sbjct: 239 AARDSVIVRDMRGVEVELKLDAVLDVTYVNHLSLISKVKHWFVSMGRFLWDDPREANTEG 298

Query: 294 GVFPAIFGTVFLVIIMSIIVMPLGVIAAIYLHEYAQEGAFTRMIRVAVINLAGVPSIVYG 353
           GVFPAIFGTVF+V++M++IV P GVIAAIY+HEYA++G  T++IR+AVINLAGVPSIVYG
Sbjct: 299 GVFPAIFGTVFMVLVMAVIVTPFGVIAAIYMHEYAKKGPITKIIRIAVINLAGVPSIVYG 358

Query: 354 VFGLGFFVYTIGASVDNLFYAERLPTPTFGTPGLLWSALTLAVLTLPVVIVATEEGLSRI 413
           VFGLGFFVY +G ++D LFYAE LP PTFG+PG++WSALTLA+LTLPVVIV+TEEGLSRI
Sbjct: 359 VFGLGFFVYMMGGTIDQLFYAEALPAPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRI 418

Query: 414 PISVRHGSLALGATQFETIWRIVLPMASPAIITGLILAIARAAGEVAPLMLVGAVKLASS 473
           P +VR GSLALGAT+ ET+WRIV+PMASPAI+TGLILA+ARAAGEVAPLMLVG VKLA +
Sbjct: 419 PSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPT 478

Query: 474 LPVDGEFPFIHLERKFMHLGFHIYDIGFQTNNIEAARPLVYATSFLLVTVIVALNLTAIS 533
           LP+D  FPF+HLERKFMHLGFHIYD+GFQ+ N+EAARPLVYATSFLLVTVI+ALNLTAIS
Sbjct: 479 LPLDFNFPFVHLERKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVTVIMALNLTAIS 538

Query: 534 IRNNLREKYRTL 545
           +RN+LREKYR+L
Sbjct: 539 VRNHLREKYRSL 550