Pairwise Alignments

Query, 731 a.a., phosphate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  577 bits (1486), Expect = e-168
 Identities = 332/732 (45%), Positives = 455/732 (62%), Gaps = 18/732 (2%)

Query: 15  RLVKDRVVRFAVTCGGVSVLGALVLIFIYLAMVVVPLFGDAKWRGDIAVKTVSTTDPLLM 74
           R  KD++ +  VT GG  V  AL+LIF YL  VV P+F  A     I V+      P LM
Sbjct: 24  RAFKDKLTQIGVTMGGTMVFVALLLIFFYLLYVVKPIFDGADVTPVINVELQDAKSPALM 83

Query: 75  TIGAYGENAFL--MSNDGVGQFWSLRSVSDQPIQTQSLGFTPVLWAQTP--PAQGWFALV 130
            +G+  +N  L  +S DG   F+S  S S    +  ++     + +     P++  FA  
Sbjct: 84  -VGSDEQNEILYRVSQDGGVSFYSALSASLVKQEQINVPQDAEIVSSVAGVPSEQRFAFG 142

Query: 131 GQDNQVAVVHPQLSHSMTTQGREFTPSLERLALPEAFRLSEQ--PLQQFAFALTAEALIF 188
             + QV +     + +     R  TPSL         ++SE   PL Q AFA  ++ L F
Sbjct: 143 LSNGQVIIGGVNFAVTYPNNKRLITPSLRYPLGASPLQVSESGTPLYQLAFASASDKLSF 202

Query: 189 ATYDNAQQIQILR-------LDRATQQEISRLSLSVPFSDLSQLLLTPDGKTLYLRTRSE 241
           A +D   +  + R       +    + E +   +    + + Q L+TPD + L LR+ + 
Sbjct: 203 AYHDANGRWFLTRHNGEENMMTEEVEWEATTSQIQEAPAQVDQQLMTPDQRQLLLRSGNR 262

Query: 242 LVVA-LLDKQSYQIREIVDLSEGDSRHQVTQLYLLSGAFSLLAVHEDGLVSQWFDVLRDG 300
           L V  +       + ++++L    ++  VT + LL+GA SLL  +++G + Q+F V  D 
Sbjct: 263 LYVYDIRYVDEIALSQVIELERAKTK--VTDVALLAGASSLLVSYDNGQIFQYFQVNGDK 320

Query: 301 QRHLNHIRNFKLASEVQFLLPDTNTKGFYSFYRNGTLQSHYTTSEKLVLFERAYQRAPQL 360
            R    IR+FK  + V+ +  +   K F +   +G L   YTTS++ +  E         
Sbjct: 321 GRQYQEIRDFKNKAGVKRIAGEFYRKSFATVSESGELDLLYTTSQRKLFTETFDLAHATQ 380

Query: 361 VAMSENQAYLASYDQGKIRLAQVENRNPEVSFSALWQKVWYESYPEPEFVWQSTAATDDF 420
           +  S     L      K+ L  VEN +PEVS+SA+W KVWYE YPEP++VWQST+ +DDF
Sbjct: 381 MGFSPRANALVVEAGNKLHLFAVENSHPEVSWSAMWSKVWYEGYPEPQYVWQSTSGSDDF 440

Query: 421 EAKFSLVPIAFGTLKAAAFAMLFAMPIAVLGAIYTAYFMTPSMRRVVKPTIELMEALPTV 480
           EAK SL+P+AFGT+KAA +AMLFA P+A+ GA+YTAYFM+P +R VVKPTIE+MEALPTV
Sbjct: 441 EAKLSLMPLAFGTMKAALYAMLFATPLAIAGAVYTAYFMSPKVRAVVKPTIEIMEALPTV 500

Query: 481 IIGFLAGLWFAPFVESHLPAVLALMILLPPSTIVLGFIWSRLPKAWLRRIPSGWHALILI 540
           I+GFLAGLW AP +E HLP ++ L++LLP S ++    W +LP  W +R+P  +  L+LI
Sbjct: 501 ILGFLAGLWLAPLIEDHLPGIIMLLVLLPISILLTALGWYKLPGRWKQRLPETYQELMLI 560

Query: 541 PVLIGISALILSYSGELENALFAGDLRVYLAQH-GIGYDQRNALVVGFAMGFAVIPTIFT 599
           PV+  +       S  +E A F GD R+++    GI +DQRNALVVG AMGFAVIPTIF+
Sbjct: 561 PVICFVGWFAFYISPSIEVAFFGGDTRLFITNELGITFDQRNALVVGIAMGFAVIPTIFS 620

Query: 600 IAEDAIFSVPKHLSDGSLALGATPWQTLIYVVLLTASPGIFSAIMMGLGRAVGETMIVLM 659
           IAEDA+FSVP+HLS+GSLALGAT WQTL  VVLLTASPGIFSA+MMGLGRAVGETMIVLM
Sbjct: 621 IAEDAVFSVPRHLSNGSLALGATNWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLM 680

Query: 660 ATGNTPLLDWNIFEGMRTLSATIAVELPESEVQSAHFRILFLAALLLLTFTFAVNSLAEW 719
           ATGNT +++W++FEGMRTL+A IAVE+PES + S+H+R+LFLAA +L  FTF  N++AE 
Sbjct: 681 ATGNTAIMEWSVFEGMRTLAANIAVEMPESAIGSSHYRVLFLAAFVLFIFTFLFNTIAEV 740

Query: 720 VRQRLREKYRSL 731
           VRQRLRE+Y SL
Sbjct: 741 VRQRLRERYSSL 752