Pairwise Alignments

Query, 433 a.a., two-component system sensor histidine kinase PhoR from Vibrio cholerae E7946 ATCC 55056

Subject, 986 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  132 bits (332), Expect = 5e-35
 Identities = 97/344 (28%), Positives = 172/344 (50%), Gaps = 28/344 (8%)

Query: 105 ESLPDAVVVFRSEGNIVWCNRLAQHLLGFRWPDDAGQPISNLLRTPD------FIKYLKK 158
           +++ DA+++  + G I   N  A+ + G+   +  GQ +S L+  PD      ++ +  +
Sbjct: 640 DNVIDAIIIIDARGIIETFNHAAEQMFGYSSAEVLGQNLSMLMPEPDRSAHDGYLDHYTQ 699

Query: 159 DDFTDPLEMRSPLNSDRM------LELRIVPYT---EGEHLMVVRDVTQLKQLEGMRRNF 209
              +  LE    L + R       +ELR+   +   E + + +VRD+T+ K++E M+   
Sbjct: 700 RGTSRALEQNRELTALRRNGDTFTIELRVSQISHHGERKFIGLVRDITERKRIERMKSEL 759

Query: 210 FANVSHELRTPMTVLQGYLEMTE-----DPDVLAGPMWSKAHGVMTEQLNRMNGLVNQLL 264
            + VSHELRTP+T + G L +       +P      M   AH    +   R+  LV+ LL
Sbjct: 760 VSIVSHELRTPLTSISGALGLIVGGALGEPSPSMRQMLDIAH----QNSLRLGRLVDDLL 815

Query: 265 TLSKIEASPMVELDQVVDVPAMLEVLEKEAVSLSGEAQHKLHFEV--DKSLKVLADEDQL 322
            + K+ A  M    +   +   L++      +    AQH++  E+    SL+++AD+D+L
Sbjct: 816 DMDKLVAGKMALALRAHSLQVQLQLAV--GANQGYAAQHRVQLELLPTPSLQLMADDDRL 873

Query: 323 RSAISNLVYNAVKYTPPGAQIDVRWYRTGKGACLEVEDKGEGIEPQHLHRLTERFYRVDK 382
           +  ++NL+ NAVK++P    + +   R G    + V D+G GI P+   R+ ++F + D 
Sbjct: 874 QQVLANLISNAVKFSPQDGTVRLGGERRGDWVRIWVRDQGPGIAPEFRARIFQKFSQADS 933

Query: 383 ARSRDTGGSGLGLAIVKHALAHHDTHLDIYSKVGVGSKFSFVLP 426
           + +R  GG+GLGLAI K  + H    +   S+ G G+ F   LP
Sbjct: 934 SDTRQKGGTGLGLAISKELIEHMHGRIGFDSEPGHGACFWCELP 977