Pairwise Alignments

Query, 433 a.a., two-component system sensor histidine kinase PhoR from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., GAF domain-containing protein from Synechocystis sp000284455 PCC 6803

 Score =  105 bits (263), Expect = 5e-27
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 34/262 (12%)

Query: 190 LMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTED-------PDV-LAGPM 241
           ++++RDVT  +++E M+ +F A VSHELRTP+T + G+  + +D       P++ LA P 
Sbjct: 686 VIMIRDVTHEREVERMKTDFLATVSHELRTPLTSILGFATVIQDKLNRVIIPELDLAQPH 745

Query: 242 WSKAH-------GVMTEQLNRMNGLVNQLLTLSKIEASPMVELDQVVDVPAMLEVLEKEA 294
             KA         ++  +  R+  L+N +L ++K+EA      +Q     A+  ++E+  
Sbjct: 746 LGKATERVMRNLAIIESEAQRLTVLINDVLDIAKMEAGQESWQEQPC---AIGPIIERAI 802

Query: 295 VSLSGEAQHK---LHFEVDKSL-KVLADEDQLRSAISNLVYNAVKYTPPGAQIDVRWYRT 350
            +++ +AQ K   L  +++  L   + DE+++   + NL+ NAVK+TP G  I  R +  
Sbjct: 803 ATITPQAQKKNISLQGDLEPGLPDFIGDENRILQVVLNLLSNAVKFTPKGL-ITARSHFH 861

Query: 351 GKGACLEVEDKGEGIEPQHLHRLTERFYR------VDKARSRDTGGSGLGLAIVKHALAH 404
                +E+ D G GI P    ++ E F +       DK +     G+GLGL I K  + H
Sbjct: 862 QNYLWVEIIDHGPGIHPADQEKIFEPFQQGGGDVLTDKPQ-----GTGLGLPICKKIVEH 916

Query: 405 HDTHLDIYSKVGVGSKFSFVLP 426
           H   + + S +G GS F F LP
Sbjct: 917 HGGTIGVNSSLGRGSTFYFSLP 938