Pairwise Alignments

Query, 433 a.a., two-component system sensor histidine kinase PhoR from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis JJ

 Score =  126 bits (317), Expect = 2e-33
 Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 2/230 (0%)

Query: 198 QLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDV-LAGPMWSKAHGVMTEQLNRM 256
           +LK+L+ ++    A VSHELRTP+T ++GY+E+  D  +        K   V  + + R+
Sbjct: 405 ELKELDKLKSELIAIVSHELRTPLTSIKGYVELVLDGTMGTINDSQKKCLQVADDNIVRL 464

Query: 257 NGLVNQLLTLSKIEASPMVELDQVVDVPAMLEVLEKEAVSLSGEAQHKLHFEVDKSLKVL 316
             L+  +L LSKIE   +    + V++ A++  + +    L+ E   KL+ EV+  + + 
Sbjct: 465 RRLIESMLDLSKIERGELEMYREKVNLRAIVCDVIEYLKPLATEKNIKLNKEVE-DIAIE 523

Query: 317 ADEDQLRSAISNLVYNAVKYTPPGAQIDVRWYRTGKGACLEVEDKGEGIEPQHLHRLTER 376
           AD+D++   ++NL+ NA+K++P    I V      +   L+V D+G GI  + + ++  R
Sbjct: 524 ADKDRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNR 583

Query: 377 FYRVDKARSRDTGGSGLGLAIVKHALAHHDTHLDIYSKVGVGSKFSFVLP 426
           FY+VD +  R  GGSGLGLA+ K  +  H   + + S++G GS F  +LP
Sbjct: 584 FYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILP 633



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 91  KELTNLIRRFRNGAESLPDAVVVFRSEGNIV 121
           KEL  L   ++N   S PD VV F  +GN+V
Sbjct: 90  KELKTLAISYKN--TSAPDFVVFFDGQGNVV 118