Pairwise Alignments

Query, 433 a.a., two-component system sensor histidine kinase PhoR from Vibrio cholerae E7946 ATCC 55056

Subject, 1019 a.a., sensor histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (275), Expect = 2e-28
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 169 SPLNSDRMLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYL 228
           S +N  ++L   +    E     + ++  +  QL  ++  F AN+SHE+RTP+T+++G+ 
Sbjct: 522 STMNEVKLLNEALEERVEKRTKELEQERDKANQLAAVKARFLANMSHEIRTPITIIKGFT 581

Query: 229 EMTEDPDVLAGPMWSKAHGVMTEQLNRMN--GLVNQLLTLSKIEASPMVELDQVVDVPAM 286
           E      +L        + +   + N ++   ++N +L  +KI+   M   +Q V +  +
Sbjct: 582 EQ-----ILPNTQGEVHNALCKIEQNTLHLQNVINDILDAAKIDEGKMTIAEQTVAIIPL 636

Query: 287 LEVLEKEAVSLSGEAQ--HKLHFEVDKSLKVLADEDQLRSAISNLVYNAVKYTPPGAQID 344
           L  L      L+       +L+ ++     ++ D  +L+  + N + NAVK+TP G    
Sbjct: 637 LNSLSDSMKFLARTKNLTTELNIDIADIEHIITDPFRLKQILLNFISNAVKFTPKGTVKL 696

Query: 345 VRWYRTGKGACLEVEDKGEGIEPQHLHRLTERFYRVDKARSRDTGGSGLGLAIVKHALAH 404
           V         C+ V DKG GI  Q    L E F + D + SRD GG+GLGL I K     
Sbjct: 697 VANITNADELCIAVIDKGIGISDQQASTLFEAFTQADSSTSRDFGGTGLGLFISKQLADA 756

Query: 405 HDTHLDIYSKVGVGSKFSFVLPKRLVAK 432
               L + S++GVGS FS  LP+  + K
Sbjct: 757 MFIKLHMQSELGVGSCFSVTLPESKIIK 784