Pairwise Alignments

Query, 229 a.a., phosphate regulon transcriptional regulatory protein PhoB from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  158 bits (400), Expect = 8e-44
 Identities = 88/230 (38%), Positives = 141/230 (61%), Gaps = 4/230 (1%)

Query: 3   RRILVVEDEAPIREMLCFVLEQKGYQAVEAEDYDSAMSKLAEPFPDLVLLDWMLPGGSGI 62
           + IL+V+D+  IRE+L   L + G+Q     D     + L     DLV+LD MLP   G 
Sbjct: 6   KNILLVDDDQEIRELLQTYLSRSGFQVRGVPDGGEFRAALCAEPADLVILDVMLPDEDGF 65

Query: 63  NLIKHMKREEMTRNIPVVMLTARGEEEDKVRGLEVGADDYITKPFSPKELVARLKAVIRR 122
           +L + +++ E   ++P++MLTA  +E D+V GLE+GADDY+ KPFSP+EL+AR+KA++RR
Sbjct: 66  SLCRWIRQHERLASMPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELLARIKALLRR 125

Query: 123 VT--PTALEDVIDVQGLKLDPVSHRV-TANDQPLDMGPTEFKMLHFFMTHQERVYSREQL 179
           V+       DV+     +LD +SHR+  A+ + + +   +F +L  F+ H +++  R+ +
Sbjct: 126 VSFAQERGSDVLAFDEWRLDMISHRLFHADGEEVFLSGADFALLKLFLDHPQQILDRDTI 185

Query: 180 LNNVWGTNVYVEDRTVDVHIRRLRKALEDAGHD-KLIQTVRGAGYRFSTK 228
            N   G  V   +R VD+ + RLR+ L D G   +LI+TVRG+GY  +T+
Sbjct: 186 ANATRGREVMPLERIVDMAVSRLRQRLRDTGKSPRLIRTVRGSGYLLATQ 235