Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Putative exonuclease, RdgC from Pseudomonas syringae pv. syringae B728a

 Score =  263 bits (672), Expect = 4e-75
 Identities = 131/304 (43%), Positives = 201/304 (66%), Gaps = 1/304 (0%)

Query: 1   MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDM-MTHVS 59
           MWFKN +VYR+ ++V F+A+ LE  LA      C SQ+   +G+V+  GK  D  + H+S
Sbjct: 1   MWFKNLLVYRLTQDVPFDAEALETALATKPARACASQEVATYGFVAPFGKGEDAPLVHIS 60

Query: 60  ENRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAF 119
           ++ +L+ A++EE++LP SV++D+L  KV+E+EAE+ R + KKE+D LK++I+   LPRAF
Sbjct: 61  QDFMLIAARKEERILPGSVVRDALKEKVDEIEAEQMRKVYKKERDQLKDEIIQAFLPRAF 120

Query: 120 SKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWV 179
            +   TF  I P +GLILV+A S K+AED+LS LR+ +GSLPV P   +++   T+T WV
Sbjct: 121 IRRSATFAAIAPKQGLILVNASSPKRAEDLLSTLREVIGSLPVRPLTVKVSPSATMTDWV 180

Query: 180 KDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRI 239
           K       F +++E EL+   +DG  +RCK+Q+L+ DEI  H+   KVVT+L++ WQD++
Sbjct: 181 KTQKAADNFFVLDECELRDTHEDGGIVRCKRQDLTGDEIQLHLSTGKVVTQLSLAWQDKL 240

Query: 240 RFVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGL 299
            FVL +   +KRL + D L++Q +    ++   +LDA F+L+      FLP+LF ALGG 
Sbjct: 241 SFVLDDKLVVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGEFLPELFEALGGE 300

Query: 300 PHPE 303
             P+
Sbjct: 301 EIPQ 304