Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., recombination associated protein (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (751), Expect = 3e-84
 Identities = 146/299 (48%), Positives = 203/299 (67%)

Query: 1   MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSE 60
           MWFKN  VYR N+  + + + LEK L +F F+PC SQD  KFG+  ALGK G  + H +E
Sbjct: 1   MWFKNLTVYRFNKPFSVDTEALEKSLEDFTFSPCSSQDISKFGFSKALGKLGHTLVHSAE 60

Query: 61  NRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAFS 120
           NR L+CA +EEK+LP+ V+K++L  KV ++EAEE R L KKEKDALKE+I   LLPRAFS
Sbjct: 61  NRHLICATKEEKILPSQVVKEALEEKVAQIEAEENRKLAKKEKDALKEEITTTLLPRAFS 120

Query: 121 KSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVK 180
           +      LI+P   +ILVD+ S  KAE++L+LLRK +GSLPV+P   +  +E  LT+W+K
Sbjct: 121 RRSQIHALILPEIEMILVDSSSATKAEELLALLRKALGSLPVIPMSFKTPIEAQLTEWLK 180

Query: 181 DGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR 240
             + P  F + +EAELKS  D+G  +R K+Q+L+ +E+L+H++  K V KLA+++   I 
Sbjct: 181 SNSAPAPFEMQDEAELKSDSDEGGIVRFKQQDLTENEVLAHLEVGKQVHKLALHFGQSIA 240

Query: 241 FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGL 299
           FVL  D  IKRL +S+E +  ND++  ED  ARLDADF+L+  E+   +  L   LGGL
Sbjct: 241 FVLQSDAGIKRLKFSEEFRAHNDEVSTEDPLARLDADFALMGSELIALMNSLVEVLGGL 299