Pairwise Alignments

Query, 304 a.a., recombination-associated protein RdgC from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  300 bits (767), Expect = 4e-86
 Identities = 147/304 (48%), Positives = 210/304 (69%)

Query: 1   MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSE 60
           MWFKN  +YR N+  +   + LE  LA+F F+PCGSQD  KFG+ +ALGK G  + H + 
Sbjct: 1   MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKKGSTLVHSAN 60

Query: 61  NRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRAFS 120
           NR L+C  +EEK+LPA VIK+SL  KV ++E EE R L KKEKDALK++I+  LLPRAFS
Sbjct: 61  NRHLICVTKEEKILPAQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFS 120

Query: 121 KSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVK 180
           +   T  LI+P   +ILVD+ S  KAE++L+LLRK +GSLPV+P   +  +E+ LT+W+K
Sbjct: 121 RRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPIESQLTEWLK 180

Query: 181 DGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR 240
           +G+ P  F + +EAELKS  D+G  +R K+Q+L  DE+L+H++  K V KLA+++   I 
Sbjct: 181 NGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSIA 240

Query: 241 FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLP 300
            +L  D S+KRL +S+E +  ND++ +ED  ARLDADF+L+  E+   +  L +ALGG+ 
Sbjct: 241 LLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGGIE 300

Query: 301 HPEA 304
             +A
Sbjct: 301 ETQA 304