Pairwise Alignments

Query, 466 a.a., U32 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., Putative collagenase from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (340), Expect = 4e-36
 Identities = 123/456 (26%), Positives = 198/456 (43%), Gaps = 84/456 (18%)

Query: 1   MTTPKTFVPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHE-NLQIGINE 59
           M+ PK  + ELLSPA  +   R A  +GADAVY G P +    R+N  N   ++   +  
Sbjct: 1   MSLPKHHL-ELLSPARDVTIAREAILHGADAVYIGGPSFG--ARHNACNEVGDIARLVEF 57

Query: 60  AHALGKKFYVVCNIQPHNSKLKTFIRDLKPVIDMGPDALIMSDPGLIMMVREEFPHMPIH 119
           AH    + +   N   H+++L+   + +  + D G DALI+ D G++ +   + P + +H
Sbjct: 58  AHRYHARVFTTINTILHDNELEPARQLIHQLYDAGVDALIVQDLGVMEL---DIPPIELH 114

Query: 120 LSVQANAVNWATVKFWASQGVERVIVSRELSLEEIEEIREKCPNTEIEVFVHGALCMAYS 179
            S Q +    A  KF    G  +++++REL+L+EI  I ++     IE F+HGALC+A+S
Sbjct: 115 ASTQTDIRTLARAKFLDQAGFSQLVLARELNLQEIRAIADET-EAAIEFFIHGALCVAFS 173

Query: 180 GRCLLSGYINKRDPNQGTCTNACRWEYKVEAAKEDEAGQIVEQFDPNAAQAIEVQNERPD 239
           G+C +S   N R  N+G C+ ACR  Y +    +D+ G++V                   
Sbjct: 174 GQCNISHAQNGRSANRGDCSQACRLPYTL----KDDQGRVV------------------- 210

Query: 240 TTIGAGKPIDDVVLLSESHRPDEKMAAFEDEHGTYIMNSKDLRAVQHVERLTQMGVHSLK 299
                                     A+E     ++++ KD     ++  L + GV S K
Sbjct: 211 --------------------------AYE----KHLLSMKDNNQSANIRALVEAGVRSFK 240

Query: 300 IEGRTKSFYYCARTAQVYRKAIDDAVAGKPFDDSLMTTLESLAHRGYTEGFLRRHTHDAY 359
           IEGR K   Y       YR+ +DD +  +P          + A  G T  F        +
Sbjct: 241 IEGRYKDMGYVKNITAYYRQRLDDVLEDRPD--------LARASSGRTAHFFVPDPDKTF 292

Query: 360 QNYDYGYSVSDTQQFVG-----EFTGKRRGAMAEVEVKNKFVL-------GDSLELMTPK 407
                 Y VS+ +  +G      FTG   G + +V  ++  V+       GD L ++  +
Sbjct: 293 HRGSTDYFVSERKVDIGAFDSPTFTGVPVGVVEKVGKRDLQVVTFDPLSNGDGLNVLVKR 352

Query: 408 GNVIFTLEAMENRKGEATDDAKGNGHFVYIPVPEEL 443
             V F     E  KGE  +D  G   + Y   P E+
Sbjct: 353 EVVGFRANIAE-PKGEFEED--GQKRYRYRVEPNEM 385