Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., ClpB protein from Pseudomonas fluorescens FW300-N2E2

 Score = 1189 bits (3076), Expect = 0.0
 Identities = 598/853 (70%), Positives = 714/853 (83%), Gaps = 2/853 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+DR TSK Q+A+SDAQSLA+G DH  IEP HLM A+L+Q G  I+PLL  +  DV  L
Sbjct: 1   MRIDRLTSKLQLALSDAQSLAVGLDHPGIEPAHLMQAMLEQQGGSIKPLLMQVGFDVNSL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           R +L + LD+LPK+    GDV +S  L  L N  D++AQ++ D +ISSE+ LLAA+++  
Sbjct: 61  RKELAKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENS 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG LL   G+++K +  AI  +RGG+ VND N EE RQAL+K+T+DLT+RAE+GKLDPV
Sbjct: 121 KLGKLLLGQGVSKKALENAINNLRGGEAVNDANHEESRQALDKYTVDLTKRAEEGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRTIQVLQRRTKNNPV+IGEPGVGKTAI EGLAQRIIN EVP+GL+G+R+LSL
Sbjct: 181 IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAKYRGEFEERLK++LNEL+K+EG IILFIDELHTMVGAGKGEGSMDAGNMLK
Sbjct: 241 DMGALIAGAKYRGEFEERLKALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTL+EYRQYIEKD ALERRFQKVLV+EP+ EDTIAILRGLKERYE+H
Sbjct: 301 PALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V ITD AI+AAA LSHRYI+DRQLPDKAIDLIDEAAS IRM+IDSKPE LD+LER++I
Sbjct: 361 HKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E QAL  E DEA++KRL  L EE+   ER+Y++LEE+W +EKA + G+  I+  +E
Sbjct: 421 QLKVESQALKKESDEAAKKRLERLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           Q+R +LE ARR GDLNRM+ELQYG IP+LE+ L +  Q    E  LLR+KVT+ EIAEV+
Sbjct: 481 QSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKSENQLLRSKVTEEEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPVSKMLE E++KLL+ME +LH+RVIGQ+EAV  V+NA+RRSRAGLSDPNRP GS
Sbjct: 541 SKWTGIPVSKMLEGERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           F+FLGPTGVGKTELCK LA FLFD+E+AMVR+DMSEFMEKHSVARL+GAPPGYVGYEEGG
Sbjct: 601 FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVL+DGRLTD  GRTVDFRNTV++MTSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS++IQE     D +  +  VMD +S HFRPEF+NRVDE V+F PL ++ I  I  IQL 
Sbjct: 721 GSTQIQELVG--DREAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLG 778

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
           RLR RL ER+ +L++ DEALD +  VG+DPVYGARPLKRAIQ+ +ENPLA+ IL+G+F+P
Sbjct: 779 RLRSRLTERELKLQLSDEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGRFMP 838

Query: 841 GSPILLSVKDGNI 853
           G  +  +V++  I
Sbjct: 839 GETVTGTVENDEI 851