Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., ClpB protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 1177 bits (3046), Expect = 0.0
 Identities = 594/856 (69%), Positives = 721/856 (84%), Gaps = 3/856 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+D+ TS+FQ A++DAQSLA+GRDH  IEPVH++ ALLDQ+G   RPLL+   V+V  L
Sbjct: 1   MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSGVNVPAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           R +LGE LD LPKVSG  G++ + + L  L N  DK+AQ+  DA+I+SE ++LAA +D  
Sbjct: 61  RERLGEALDTLPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDAS 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
           PLG  L+  G  +KK+  AI+K+RGG+ V   NAEE RQALEK+TIDLT RAE GKLDPV
Sbjct: 121 PLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQALEKYTIDLTARAESGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVLQRRTKNNPV+IGEPGVGKTAIVEGLAQRIIN EVPEGLRG+RVLSL
Sbjct: 181 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAK+RGEFEERLK+VL++L+K EG IILFIDELHTMVGAGK +G+MDAGNMLK
Sbjct: 241 DMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHC+GATTLDEYR+YIEKD ALERRFQKV V EPTVEDTIAILRGLKERY +H
Sbjct: 301 PALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H VEITDPAIVAAA+LS+RYI+DRQLPDKAIDL+DEAAS IRM+IDSKPE LD+LER++I
Sbjct: 361 HGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKI+++ L  E DEAS +RLA L  ++ + ER++++L EVWK+EKAAL GT  IK  +E
Sbjct: 421 QLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
            A+++LE A+R  D  +MSE+QYG +P+LEKQ+ LA + E  +  L++++VT  EIAEV+
Sbjct: 481 HAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           S+ TGIPV+KMLE E++KLLRMED LH+RV+GQ+EA++VV++A+RRSRAGLSDPNRP GS
Sbjct: 541 SRWTGIPVNKMLEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK LA+FLFDS +AM+R+DMSEFMEKHSV+RL+GAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRR+PYS+ILLDEVEKAH DVFNILLQVLDDGRLTDGQGRTVDFRNTV++MTSNL
Sbjct: 661 YLTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL 720

Query: 721 GSSRIQE---NFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASI 777
           GS +IQE   + +   Y  +K  VM VV  HFRPEF+NR+D+ VVFHPL +  IKSIA I
Sbjct: 721 GSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARI 780

Query: 778 QLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGK 837
           QL  L +RLAER  +L++DD AL+L+ +VGFDPVYGARPLKRAIQ  VENPLA+ IL+G+
Sbjct: 781 QLQGLEKRLAERGLKLDLDDPALELLGNVGFDPVYGARPLKRAIQSQVENPLAQQILSGQ 840

Query: 838 FLPGSPILLSVKDGNI 853
           +  G  + +  + G++
Sbjct: 841 YTSGDTVRVRTEGGHL 856