Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., AAA ATPase, central region:Clp, N terminal:Clp, N terminal from Pseudomonas syringae pv. syringae B728a

 Score = 1179 bits (3050), Expect = 0.0
 Identities = 599/853 (70%), Positives = 705/853 (82%), Gaps = 2/853 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+DR TSK Q+A+SD+QSLA+G DH  IEP HLM ALL+Q G  I+PLL  +  D+  L
Sbjct: 1   MRIDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLLQVGFDINSL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           R +L   LDRLPK+    GDV +S  L  L N  D++AQ++ D +ISSE+ LLAA+++  
Sbjct: 61  RKELSAELDRLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENS 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            LG LL   G+++K +  AI  +RG   VNDPN EE RQAL+K+T+DLT+RAE+GKLDPV
Sbjct: 121 KLGKLLLGQGVSKKALENAINNLRGEGAVNDPNVEESRQALDKYTVDLTKRAEEGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRTIQVLQRRTKNNPV+IGEPGVGKTAI EGLAQRIIN EVP+GLRG+R+LSL
Sbjct: 181 IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAKYRGEFEERLKS+LNEL+K+EG IILFIDELHTMVGAGKGEGSMDAGNMLK
Sbjct: 241 DMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTL+EYRQYIEKD ALERRFQKVLVDEP+ EDTIAILRGLKERYE+H
Sbjct: 301 PALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V ITD AI+AAA LSHRYI+DRQLPDKAIDLIDEAAS IRM+IDSKPE LD+LER++I
Sbjct: 361 HKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E QAL  E DEA+ KRL  L  E++  E +YA+LEE+W +EKA ++G+  I+  +E
Sbjct: 421 QLKVEAQALKKEKDEAAIKRLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           Q+R +LE ARR GDLNRM+ELQYG IP+LE+ L +  Q    E  LLR+KVT+ EIAEV+
Sbjct: 481 QSRQELEAARRRGDLNRMAELQYGIIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAEVV 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPVSKMLE E++KLLRME +LH RVIGQ+EAV  V+NA+RRSRAGLSDPNRP GS
Sbjct: 541 SKWTGIPVSKMLEGERDKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           F+FLGPTGVGKTELCK LA FLFD+E+AMVR+DMSEFMEKHSVARL+GAPPGYVGYEEGG
Sbjct: 601 FMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYS+ILLDEVEKAH DVFNILLQVL+DGRLTD  GRTVDFRNTV++MTSNL
Sbjct: 661 YLTEAVRRKPYSLILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS++IQE     D +  +  VMD V  HFRPEF+NR+DE V+F PL ++ I  I  IQL 
Sbjct: 721 GSAQIQELVG--DREAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLG 778

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
           RLR+RLAER+  + +  EALD +  VG+DPVYGARPLKRAIQ+ +ENPLA+ IL+G F+P
Sbjct: 779 RLRKRLAERELSMTLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQMILSGSFMP 838

Query: 841 GSPILLSVKDGNI 853
           G+ I   V D  I
Sbjct: 839 GTTITGKVVDDEI 851