Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., clpB protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 1333 bits (3449), Expect = 0.0
 Identities = 673/857 (78%), Positives = 762/857 (88%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLDR T+KFQIAISDAQSLALGRDHQ+IEPVHLM+ALL+Q+G  I PLLT   + V  L
Sbjct: 1   MRLDRMTNKFQIAISDAQSLALGRDHQFIEPVHLMMALLNQDGGSIHPLLTQSGIRVSNL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           RS L + L+R P+V G GGDVQLS AL  L NLCDK++QKR+D YISSE+++LAA+E   
Sbjct: 61  RSLLSQELERQPQVEGTGGDVQLSQALIRLLNLCDKLSQKRKDKYISSELFVLAALEGND 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            L  +LK+ G T++++ + IE+IR GQKV+DPNAE+ RQAL+K+T+DLTERAEQGKLDPV
Sbjct: 121 TLAQILKQAGATKERLEQTIEEIRAGQKVDDPNAEDNRQALKKYTVDLTERAEQGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRTIQVLQRR+KNNPV+IGEPGVGKTAIVEGLAQRI+N EVPEG++ +RVLSL
Sbjct: 181 IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGALVAGAKYRGEFEERLK+VLNELA+EEG +ILFIDELHTMVGAGK +G+MDAGNMLK
Sbjct: 241 DMGALVAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYRQY+EKD ALERRFQKVLVDEPTVEDTIAILRGLKERYELH
Sbjct: 301 PALARGELHCVGATTLDEYRQYVEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           HHVEITDPAIVAAAS+SHRY+SDR+LPDKAIDLIDEAASSIRMQIDSKPE+LD+LER+ I
Sbjct: 361 HHVEITDPAIVAAASMSHRYVSDRKLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRAI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E+QAL+ E+DEAS KRL  L  EL+E E    EL E+W+ EKAAL+GTQHIKA LE
Sbjct: 421 QLKLEEQALAKENDEASRKRLEHLRHELKEVEAKANELNEIWRTEKAALAGTQHIKADLE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QARMDLEVARRA DL RMSELQYGRIPELEKQLDLAAQAEMQ+M LLRNKVTD EIAEVL
Sbjct: 481 QARMDLEVARRASDLTRMSELQYGRIPELEKQLDLAAQAEMQDMKLLRNKVTDVEIAEVL 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPV+KMLE E+EKLL+ME  LH+RVIGQ EAV+ VANAIRRSRAGL+DPNRPIGS
Sbjct: 541 SKATGIPVAKMLEGEREKLLQMEHALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK+LA FLFD+E A+VR+DMSEFMEKHSV+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS  IQE F  LDY  +K++VM+VV   FRPEFLNR+DE+VVFHPL  EHIK+IASIQ+ 
Sbjct: 721 GSDIIQERFGTLDYAQMKQEVMNVVVHSFRPEFLNRIDETVVFHPLDAEHIKNIASIQIE 780

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
            LR+RLAER+++LE+ DEAL  IA  GFDPVYGARPLKRA+QQ VENPLA+ +L G+F+P
Sbjct: 781 SLRKRLAEREFELELSDEALAFIARAGFDPVYGARPLKRALQQEVENPLAQKLLRGEFIP 840

Query: 841 GSPILLSVKDGNIFASQ 857
           G PI +  +D  +  +Q
Sbjct: 841 GKPIRVDCQDAELVFAQ 857