Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., ClpB protein from Caulobacter crescentus NA1000

 Score =  950 bits (2456), Expect = 0.0
 Identities = 485/854 (56%), Positives = 635/854 (74%), Gaps = 4/854 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           M +D ++ + + A+  AQSLAL R HQ   P H++  LL++     R L+        QL
Sbjct: 1   MNIDLYSDRAKQAVQSAQSLALARGHQQFAPEHILKVLLEEKDGLSRALIQSAGGRPDQL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
              +  +L + P+V G GG + +      +F   +K A+   DA++++E  L+A  ++ G
Sbjct: 61  DGGVETLLAKTPRVDGAGGQLYMKPDTARVFAEAEKSAKAAGDAFVTTERLLIAIAKEGG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
               L KE G++ + +  A   +R G+  +  NAEE  +AL+++  DLT  A  GKLDPV
Sbjct: 121 EAAKLFKEAGVSAQSLETAANAMRKGRTADSANAEEGYEALKRYARDLTAAARDGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRD+EIRRTIQVL RRTKNNPV+IGEPGVGKTAIVEGLA RI+N +VPE L+ +++LSL
Sbjct: 181 IGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMG+L+AGAKYRGEFEERLK+VL E+   EG+IILFIDE+HT+VGAGKG+G+MDA N+LK
Sbjct: 241 DMGSLIAGAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGAMDASNLLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHCVGATTLDEYR+++EKD AL RRFQ V V EPTVEDT++ILRGLKE+YE+H
Sbjct: 301 PALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEVH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V I+D AIVAAA+LS+RYI+DR LPDKAIDL+DEA+S +RMQIDSKPE LD+++R+++
Sbjct: 361 HGVRISDSAIVAAATLSNRYIADRFLPDKAIDLVDEASSRVRMQIDSKPEELDEIDRRLV 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKIE++ALS E D AS++RL  L  E+ + +    E+   WKAEK  + G    + AL+
Sbjct: 421 QLKIEREALSKETDAASKQRLENLEVEIDDLQFRSDEMTARWKAEKEKVGGAAQAREALD 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAE-IAEV 539
           + R DL  A+RAGD  R  ++QYG IP LE++L   A+AE  +   L  +V DAE IA V
Sbjct: 481 RLRADLANAQRAGDFARAGQIQYGEIPALERRL---AEAEAGDTQALTPEVVDAEQIAAV 537

Query: 540 LSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIG 599
           +S+ TG+PV KMLE E+EKLL+MED L  RV+GQ EA+E V++A+RR+RAGL DP++PIG
Sbjct: 538 VSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQDPSKPIG 597

Query: 600 SFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEG 659
           SFLFLGPTGVGKTEL K+LA FLF  E A+ R+DMSE+MEKHSV+RL+GAPPGYVGY+EG
Sbjct: 598 SFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHSVSRLIGAPPGYVGYDEG 657

Query: 660 GYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 719
           G LTEA+RR+PY V+L DE+EKAHPDVFN+LLQVLDDGRLTDGQGRTVDFRNT++IMTSN
Sbjct: 658 GALTEAIRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN 717

Query: 720 LGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQL 779
           LG+  +       D + ++  VM+ V  HFRPEFLNR+DE ++F  L + ++  I  IQL
Sbjct: 718 LGAEYLASQEDGEDVEAVRPMVMNTVRGHFRPEFLNRIDEIILFKRLSRHNMGDIVRIQL 777

Query: 780 ARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFL 839
            R+ + LA+R   L +D EAL+ +A  G+DPVYGARPLKR IQ+ + +P+AK +LAG+  
Sbjct: 778 QRVEKLLADRRMALALDAEALNWLADKGYDPVYGARPLKRVIQKELVDPIAKKLLAGEIE 837

Query: 840 PGSPILLSVKDGNI 853
            G  I + V DG +
Sbjct: 838 DGGVIAVGVTDGQL 851