Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., ATP-dependent chaperone ClpB from Ralstonia sp. UNC404CL21Col

 Score = 1099 bits (2842), Expect = 0.0
 Identities = 559/855 (65%), Positives = 683/855 (79%), Gaps = 6/855 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLD+ T++FQ A++DAQSLALG D+ YIEPVHL++A+L Q     + LL    V+   L
Sbjct: 1   MRLDKLTTRFQEALADAQSLALGNDNPYIEPVHLLLAMLRQPDGATKNLLARAGVNTGAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
            + L   +  LP+V G G  VQ+   LGSL    +K   KR D +I+SE++LLA  +DKG
Sbjct: 61  DTALDRAIKHLPQVQG-GEQVQVGRDLGSLLQATEKEGIKRGDQFIASELFLLAVADDKG 119

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
             G + +E GL+ K +  AI+ +RGGQ V    AE  R+AL+K+TIDLTERA  GKLDPV
Sbjct: 120 EAGRIAREHGLSRKPLEAAIDAVRGGQTVGSAEAESQREALKKYTIDLTERARIGKLDPV 179

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRR IQ+LQRRTKNNPV+IGEPGVGKTAIVEGLAQRI+N EVPE L+ +RVL L
Sbjct: 180 IGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVL 239

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DM  L+AGAKYRGEFEERLK+VLN++AKEEG  ILFIDE+HTMVGAGK EG+MDAGNMLK
Sbjct: 240 DMAGLLAGAKYRGEFEERLKAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAMDAGNMLK 299

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARGELHC+GATTLDEYR+YIEKD ALERRFQKVLV EP+VE TIAILRGL+E+YELH
Sbjct: 300 PALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPSVEATIAILRGLQEKYELH 359

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H VEITDPAIVAAA LSHRYI+DR LPDKAIDLIDEAA+ I+M+IDSKPEA+DKL+R++I
Sbjct: 360 HGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLI 419

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKIE++A+  E DEAS+KRL ++ +E++  +++YA+L+E+WKAEK A  G   +K  ++
Sbjct: 420 QLKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEID 479

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAE----MQEMTLLRNKVTDAEI 536
           + ++++   +R G L +++ELQYG++PELE +L  A  AE     Q   LLR +V   EI
Sbjct: 480 KIKLEITKLQREGKLEKVAELQYGKLPELEGKLKAATAAESAGQKQPNKLLRTQVGAEEI 539

Query: 537 AEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNR 596
           AEV+S+ TGIPVSKM+  E+EKLL+MED LH+RV+GQ EAV +V++AIRRSRAG++D N+
Sbjct: 540 AEVVSRATGIPVSKMMTGEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENK 599

Query: 597 PIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGY 656
           P GSFLFLGPTGVGKTELCK LA FLFDSED ++R+DMSEFMEKHSV+RL+GAPPGYVGY
Sbjct: 600 PYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEFMEKHSVSRLIGAPPGYVGY 659

Query: 657 EEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716
           EEGGYLTEAVRRKPYSV+LLDEVEKAHPDVFN+LLQVLDDGRLTDGQGRTVDF+NTV++M
Sbjct: 660 EEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVM 719

Query: 717 TSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIAS 776
           TSNLGS  IQ+  A      IK  V   V  HFRPEFLNR+DE VVFH L Q +I+SIA 
Sbjct: 720 TSNLGSQLIQQ-MATEPADVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIAR 778

Query: 777 IQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAG 836
           IQL RL  RLA+ D  LE+ DEA+  +A  G+DPV+GARPLKRAIQQ +ENP+A+ IL G
Sbjct: 779 IQLKRLSARLAQMDLALEISDEAVAKLASAGYDPVFGARPLKRAIQQQLENPVARMILEG 838

Query: 837 KFLPGSPILLSVKDG 851
           KF P   + +  +DG
Sbjct: 839 KFAPKDVVPVDYRDG 853