Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., protein disaggregation chaperone from Burkholderia phytofirmans PsJN

 Score = 1129 bits (2920), Expect = 0.0
 Identities = 565/859 (65%), Positives = 700/859 (81%), Gaps = 7/859 (0%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MR+D+ T+KFQ A++DAQSLA+G D+QYIEPVH++ AL+ Q+    R LL+   V V  L
Sbjct: 1   MRIDKLTTKFQEALADAQSLAVGHDNQYIEPVHVLSALVAQHDGSARSLLSRAGVHVQAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           ++ LG+ + RLP+V G  G+VQ+   L  L N  DK AQK  D +I+SE++LLA  +DKG
Sbjct: 61  QTALGDAITRLPQVQGTDGNVQIGRELTGLLNQADKEAQKLNDTFIASEMFLLAVADDKG 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
             G L ++ GL+ K +  AI  +RGG +V+  +AE  R+AL+K+T+DLTERA  GKLDPV
Sbjct: 121 EAGRLARQHGLSRKSLESAIVAVRGGSQVHSQDAESQREALKKYTVDLTERARAGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRR+IQ+LQRRTKNNPV+IGEPGVGKTAIVEGLAQRI+N EVPE L+G+RVLSL
Sbjct: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DM AL+AGAKYRGEFEERLK+VL+++AK+EG  I+FIDE+HTMVGAGK EG+MDAGNMLK
Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLSDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PAL+RGELHCVGATTLDEYR+YIEKD ALERRFQKVLVDEPTVE TIAILRGL+E+YELH
Sbjct: 301 PALSRGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           H V+ITDPAIVAAA LSHRYI+DR LPDKAIDLIDEAAS I+M+IDSKPE +D+L+R++I
Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLKIE++A+  E DEAS+KRL ++ EE++   R+Y++LEE+W AEKAA+ G+  +K  +E
Sbjct: 421 QLKIEREAVKKEKDEASQKRLQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMT------LLRNKVTDA 534
           + R ++   +R G L +++ELQYG++P LE QL    +AE  E        LLR +V   
Sbjct: 481 KTRAEITRLQREGKLEKVAELQYGKLPGLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAE 540

Query: 535 EIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDP 594
           EIAEV+S+ TGIPVS+M++ E+EKLL++E+ LH RV+GQ EA+  VA+AIRRSRAGLSDP
Sbjct: 541 EIAEVVSRSTGIPVSRMMQGEREKLLQIEEKLHARVVGQDEAISAVADAIRRSRAGLSDP 600

Query: 595 NRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYV 654
           NRP GSFLFLGPTGVGKTELCK LA+FLFDSED ++R+DMSEFMEKHSVARL+GAPPGYV
Sbjct: 601 NRPYGSFLFLGPTGVGKTELCKALASFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYV 660

Query: 655 GYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVV 714
           GYEEGGYLTEAVRRKPYSVILLDE+EKAHPDVFN+LLQVLDDGR+TDGQGRTVDF+NTV+
Sbjct: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720

Query: 715 IMTSNLGSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSI 774
           +MTSNLGS  IQ        + +K+ V + V  HFRPEFLNR+D+ VVFH L + +I+SI
Sbjct: 721 VMTSNLGSQVIQSMVGE-PQEAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSI 779

Query: 775 ASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSIL 834
           A IQL RL +RLA+ D QL V D AL+ +  VG+DP++GARPLKRAIQQ +ENP+AK IL
Sbjct: 780 ARIQLQRLHERLAKLDMQLVVSDSALEHVGKVGYDPLFGARPLKRAIQQEIENPVAKLIL 839

Query: 835 AGKFLPGSPILLSVKDGNI 853
           AGKF P   I + V+DG +
Sbjct: 840 AGKFGPKDVIPVEVEDGKL 858