Pairwise Alignments

Query, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., ATPase (RefSeq) from Shewanella sp. ANA-3

 Score = 1325 bits (3430), Expect = 0.0
 Identities = 669/857 (78%), Positives = 758/857 (88%)

Query: 1   MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQL 60
           MRLDR T+KFQ+AISDAQSLALGRDHQ+IEP+HLM+ALL+Q+   I PLLT   + V  L
Sbjct: 1   MRLDRMTNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSAL 60

Query: 61  RSKLGEMLDRLPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIEDKG 120
           RS L + L+RLP+V G GGDVQLS  L  L NLCDK+AQKR+D YISSE+++LAA+E   
Sbjct: 61  RSLLSQELERLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALEGSD 120

Query: 121 PLGHLLKEFGLTEKKVSEAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180
            L   LK+ G T++ + + IE++RGGQ V+DPNAE+ RQAL+KFT+DLTERAEQGKLDPV
Sbjct: 121 ALAQCLKKSGATKELLEQTIEQVRGGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPV 180

Query: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240
           IGRDDEIRRTIQVLQRR+KNNPV+IGEPGVGKTAIVEGLAQRI+N EVPEG++ +RVLSL
Sbjct: 181 IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL 240

Query: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLK 300
           DMGAL+AGAKYRGEFEERLK+VLNELA+EEG +ILFIDELHTMVGAGKG+G+MDAGNMLK
Sbjct: 241 DMGALIAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELH 360
           PALARG+LHCVGATTLDEYRQYIEKD ALERRFQKVLVDEP+VEDTIAILRGLKERYELH
Sbjct: 301 PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH 360

Query: 361 HHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKII 420
           HHVEITDPAIVAAA++SHRY+SDR+LPDKAIDLIDEAASSIRMQ+DSKPE+LD+LER+ I
Sbjct: 361 HHVEITDPAIVAAATMSHRYVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAI 420

Query: 421 QLKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALE 480
           QLK+E+QAL+ E+DEAS +RL  L  EL E E   +EL E+W+ EKAAL+GTQHIKA LE
Sbjct: 421 QLKLEEQALAKENDEASRRRLEHLRVELHEVEAKASELNEIWRTEKAALAGTQHIKADLE 480

Query: 481 QARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEIAEVL 540
           QARMDLEVARRAGDL RMSELQYGRIPELEKQLDLA+QAEMQ+MTLLRNKVTD EIAEVL
Sbjct: 481 QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDLEIAEVL 540

Query: 541 SKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGS 600
           SK TGIPVSKMLE E+EKLL+ME  LH+RVIGQ EAV+ VANAIRRSRAGL+DPNRPIGS
Sbjct: 541 SKATGIPVSKMLEGEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGS 600

Query: 601 FLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGG 660
           FLFLGPTGVGKTELCK+LA FLFD+E A+VR+DMSEFMEKH+V+RLVGAPPGYVGYEEGG
Sbjct: 601 FLFLGPTGVGKTELCKSLAKFLFDTESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGG 660

Query: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL 720
           YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTV+IMTSNL
Sbjct: 661 YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL 720

Query: 721 GSSRIQENFARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLA 780
           GS  IQE F  L Y  +K  VM+VV+  FRPEFLNR+DESVVFHPL  E+IK IASIQ+A
Sbjct: 721 GSDIIQEGFGHLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIA 780

Query: 781 RLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAKSILAGKFLP 840
            LR+RLAE+DY LE+ DEAL LIA +GFDPVYGARPLKRA+QQ +ENPLA+ +L G  LP
Sbjct: 781 SLRKRLAEKDYTLEITDEALSLIAEIGFDPVYGARPLKRALQQEMENPLAQKLLRGDLLP 840

Query: 841 GSPILLSVKDGNIFASQ 857
           G PI +S   G +   Q
Sbjct: 841 GKPIKVSCAGGELVFEQ 857