Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  111 bits (278), Expect = 1e-29
 Identities = 74/221 (33%), Positives = 107/221 (48%), Gaps = 18/221 (8%)

Query: 84  LNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVHRLDKDTT 143
           + I+++D  ++V++KP   +  PG    +K  L   L         P A IVHRLD +T+
Sbjct: 6   IRIIHQDAAVLVVDKPTLLLSVPGRADDNKDCLITRLQENG----YPEARIVHRLDWETS 61

Query: 144 GLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTA-GGMIDKPIGRHS-TKRTLMSV 201
           G++++A+       L R    R+  + Y A+  G      G ID P+     TK   +  
Sbjct: 62  GIILLARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPRHVVD 121

Query: 202 SPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAYLQHPLLGDTAYGGRARIPK 261
              GKHA+T +RV E   +  R+ L   TGR+HQ+RVHM  + HPLLGD  Y        
Sbjct: 122 HEHGKHALTFWRVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAH------ 175

Query: 262 GATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVP 302
                  + +  + R  LHA ML F HP +GE L F  P P
Sbjct: 176 ------PQALAAWPRLCLHASMLSFTHPQSGERLRFECPAP 210