Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., ribosomal large subunit pseudouridine synthase A from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (279), Expect = 1e-29
 Identities = 74/221 (33%), Positives = 107/221 (48%), Gaps = 18/221 (8%)

Query: 84  LNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVHRLDKDTT 143
           + I+++D  ++VI+KP   +  PG    +K  L   L         P A IVHRLD +T+
Sbjct: 6   IRIIHQDAAVLVIDKPTLLLSVPGRADDNKDCLITRLQENG----YPEARIVHRLDWETS 61

Query: 144 GLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTA-GGMIDKPIGRHS-TKRTLMSV 201
           G++++A+       L R    R+  + Y A+  G  +   G ID P+     TK   +  
Sbjct: 62  GIILLARDADTHRELSRQFHDRETEKAYTALCWGQPSLDSGSIDLPLRYDPPTKPRHVVD 121

Query: 202 SPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAYLQHPLLGDTAYGGRARIPK 261
              GKHA+T ++V E    + R+ L   TGR+HQ+RVHM  + HPLLGD  Y        
Sbjct: 122 HEGGKHALTFWKVVERHDTYCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAH------ 175

Query: 262 GATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVP 302
                  E +  + R  LHA ML F HP TGE + F    P
Sbjct: 176 ------PEALAAYPRLCLHASMLSFTHPGTGERMTFECAAP 210