Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., ribosomal large subunit pseudouridine synthase D from Synechococcus elongatus PCC 7942

 Score =  110 bits (275), Expect = 8e-29
 Identities = 74/215 (34%), Positives = 108/215 (50%), Gaps = 24/215 (11%)

Query: 80  QDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGIVHRLD 139
           + L L I+YED D++ I KP   +  PG     +     LL    P  ++P   +VHRLD
Sbjct: 334 EPLELPILYEDADLLAIIKPAGLLSVPGTRGLQQASAIQLLRQQFP--DLPTYCVVHRLD 391

Query: 140 KDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTM-TAGGMIDKPIGRHSTKRTL 198
           + T+G+++VA+  P Q  L    ++R V + YEA++ G      G ID P+    T+R  
Sbjct: 392 QATSGILLVARNRPTQVALFEQFRRRQVHKVYEALLEGQPDCTAGTIDLPLRPDWTRRPY 451

Query: 199 MSVS-PMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAY---LQHPLLGDTAYG 254
             V    G+ A+T+YR  +   +  R+ L   TGRTHQ+RVHMA+   L  P+LGD  YG
Sbjct: 452 QLVDRDRGRPALTYYRCIDQTGDRCRMELEPITGRTHQLRVHMAHPEGLGQPILGDDLYG 511

Query: 255 GRARIPKGATEELTEMIRDFDRQALHAVMLKFEHP 289
                            +  DR  LHA  ++F HP
Sbjct: 512 -----------------QSSDRLYLHARSIRFRHP 529