Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  291 bits (745), Expect = 2e-83
 Identities = 154/302 (50%), Positives = 205/302 (67%), Gaps = 15/302 (4%)

Query: 17  GQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMGGEVITVQAELEDEQ- 75
           G+RLDQ +AEL   +SR+RL+ W+ EG++++NG  + +P+ K++GGE + ++ E++DE+ 
Sbjct: 34  GRRLDQVLAELLPQYSRNRLQTWIREGRVSLNGQPVQEPKHKLLGGEFLNLE-EVQDEKL 92

Query: 76  -RWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALLFHYSPIAEVPRAGI 134
                +D+P  +VYED+ I++INKP   VVHPG+G    T+LNALL H   +A+VPRAGI
Sbjct: 93  AAETPEDIPFPVVYEDEAILIINKPAGLVVHPGSGNWSGTLLNALLHHTPQLAQVPRAGI 152

Query: 135 VHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMTAGGMIDKPIGRHST 194
           VHRLDKDT+GLMVVAKT+ AQT LVR LQ R V REY A+++G +   G +D PIGRH T
Sbjct: 153 VHRLDKDTSGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVGYLNRNGTVDAPIGRHPT 212

Query: 195 KRTLMS-VSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMAYLQHPLLGDTAY 253
           +RT M+ V   G+ A THY V EHF   T ++ RLETGRTHQIRVHMA L  PL+GD  Y
Sbjct: 213 QRTKMAVVQHNGREARTHYTVLEHFERCTLVQCRLETGRTHQIRVHMAALGFPLVGDAVY 272

Query: 254 GGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVPDDMVEMTLALR 313
                  KG T  +      F RQALHA  L   HP+T E +++ APVPDDM  +   LR
Sbjct: 273 N------KGKTAGVR-----FPRQALHAYRLGLIHPLTREPMQWDAPVPDDMAALLKTLR 321

Query: 314 ED 315
            +
Sbjct: 322 SE 323