Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Conserved hypothetical protein member of yabO/yceC/yfiI family from Mycobacterium tuberculosis H37Rv

 Score =  163 bits (412), Expect = 6e-45
 Identities = 112/312 (35%), Positives = 152/312 (48%), Gaps = 23/312 (7%)

Query: 11  VKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVMGGEVITVQAE 70
           V D   G R+D  +A L    SR+       EG + +NG V      +++ G ++ V+  
Sbjct: 8   VPDGLAGMRVDTGLARLL-GLSRTAAAALAEEGAVELNG-VPAGKSDRLVSGALLQVRLP 65

Query: 71  LEDEQRWEAQDLPLNI-----VYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL---FH 122
              E     Q+ P++I     +Y DDDI+ ++KP     H   G    TVL  L    + 
Sbjct: 66  ---EAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLAAAGYR 122

Query: 123 YSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT-A 181
            +      R GIVHRLD  T+G+MVVA +  A T L RA + R V + Y A+V G    +
Sbjct: 123 ITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQGHPDPS 182

Query: 182 GGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHMA 241
            G ID PIGRH       +++  G+H++THY   E F   + L + LETGRTHQIRVH A
Sbjct: 183 SGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQIRVHFA 242

Query: 242 YLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPV 301
            L HP  GD  YG   ++ K             DRQ LHA  L F HP  G  +E  +P 
Sbjct: 243 ALHHPCCGDLVYGADPKLAKRL---------GLDRQWLHARSLAFAHPADGRRVEIVSPY 293

Query: 302 PDDMVEMTLALR 313
           P D+      LR
Sbjct: 294 PADLQHALKILR 305