Pairwise Alignments

Query, 324 a.a., ribosomal large subunit pseudouridine synthase D from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase from Klebsiella michiganensis M5al

 Score =  451 bits (1159), Expect = e-131
 Identities = 214/322 (66%), Positives = 265/322 (82%)

Query: 1   MAHQIELTQTVKDSQLGQRLDQAVAELFTDFSRSRLKEWLLEGKIAVNGDVITKPRTKVM 60
           MA +++L  TV ++QLGQRLDQA+AELF D+SRSR+KEW+L+ ++ VNG V  KP+ KV+
Sbjct: 1   MAQRVQLNATVSENQLGQRLDQALAELFPDYSRSRIKEWILDQRVLVNGCVSDKPKEKVL 60

Query: 61  GGEVITVQAELEDEQRWEAQDLPLNIVYEDDDIIVINKPRDFVVHPGAGQADKTVLNALL 120
           GGE I +  E+E+E R++ QD+PLNIVYEDDDI+VINKPRD VVHPGAG  D TVLNALL
Sbjct: 61  GGETIAIDVEIEEEVRFQPQDIPLNIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALL 120

Query: 121 FHYSPIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQKRDVTREYEAIVIGTMT 180
            +Y  IA+VPRAGIVHRLDKDTTGLMVVAKT+PAQTRLV +LQ R++TREYEA+ IG MT
Sbjct: 121 HYYPAIADVPRAGIVHRLDKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMT 180

Query: 181 AGGMIDKPIGRHSTKRTLMSVSPMGKHAVTHYRVAEHFREHTRLRLRLETGRTHQIRVHM 240
           AGG +++PI RH TKRT M+V PMGK AVTHYR+ EHFR HTRLRLRLETGRTHQIRVHM
Sbjct: 181 AGGTVEEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHM 240

Query: 241 AYLQHPLLGDTAYGGRARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAP 300
           A++ HPL+GD  YGGR R PKGA+EE    +R FDRQALHA ML+  HP++G E+E+HAP
Sbjct: 241 AHITHPLVGDQVYGGRPRPPKGASEEFITALRKFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 VPDDMVEMTLALREDAKLNRTE 322
           +P DMV++  A+R D + ++ +
Sbjct: 301 IPQDMVDLIDAMRADFETHKDD 322