Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) from Pseudomonas fluorescens FW300-N2E2

 Score =  176 bits (445), Expect = 7e-49
 Identities = 90/239 (37%), Positives = 145/239 (60%), Gaps = 2/239 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRY 60
           +K+  L  +LAL+    CSS   V  ++   +LY +AQ  L + ++ +A  KL+AL+SRY
Sbjct: 3   VKHLLLIAILALTA--ACSSKEVVDENLSEVELYQQAQNDLDNNSYTSATAKLKALESRY 60

Query: 61  PFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRN 120
           PFG Y++Q QL+LIYA YKN +     +  ERF RL+P H  +D+  Y++GLT   QD  
Sbjct: 61  PFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYLKGLTSFDQDVG 120

Query: 121 FMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATA 180
            +     +D   RDP   + ++ +F +L  R+PNS Y+ DA++RM  L+N LA Y++  A
Sbjct: 121 LLARFLPLDMTKRDPGAARDSYNEFAQLTSRFPNSRYSPDAKQRMIYLRNLLASYEIHVA 180

Query: 181 DFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           D+YL R+A++AA NR + + + + +T +    L +  EAYQ+L L +    + + ++LN
Sbjct: 181 DYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELAATSLETLKLN 239