Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., outer membrane assembly lipoprotein YfiO from Pseudomonas stutzeri RCH2

 Score =  185 bits (469), Expect = 1e-51
 Identities = 95/239 (39%), Positives = 147/239 (61%), Gaps = 2/239 (0%)

Query: 1   MKYQTLSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRY 60
           +K+  L  +LAL+    CSS+  V  ++   +LY +AQ  L + ++ +AI KL+AL+SRY
Sbjct: 3   VKHLLLIAILALTA--ACSSNETVDENLGEVELYQQAQADLDNKSYTSAISKLKALESRY 60

Query: 61  PFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRN 120
           PFG ++EQ QL+LIYAYY+N +     +  ERF RL+P H  +D+  Y++GL    QDR 
Sbjct: 61  PFGRFAEQAQLELIYAYYRNVEPEAARSAAERFIRLHPQHPNVDYAYYLKGLASFDQDRG 120

Query: 121 FMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATA 180
            +     +D   RDP   + +F +F +L  RYPNS Y+ DA+ RM  L+N LA  ++  A
Sbjct: 121 LLARFLPLDMTKRDPGAARDSFNEFAQLTSRYPNSRYSPDAKARMIYLRNLLAANEIHVA 180

Query: 181 DFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
            +YL+R+A++AA NR + + + +  T A    L +  EAYQ+LGL D  + + + +QLN
Sbjct: 181 HYYLKRQAYVAAANRGRYVVENFQSTPAVADGLAVMTEAYQRLGLDDLADTSLKTLQLN 239