Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., putative outer membrane assembly lipoprotein from Phaeobacter inhibens DSM 17395

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 16/242 (6%)

Query: 4   QTLSGLLALSLLFGC------SSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALD 57
           +T+  +L ++ L GC      + S   +    P Q+Y   +  ++      A      ++
Sbjct: 9   KTIGAVLLVAALSGCGGDGGAAKSSQPLEGFTPEQIYERGEFEMERNRTEDAAFYFSEIE 68

Query: 58  SRYPFGAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQ 117
             YP+ ++++Q  +   YAY+   D     A  +R+    PT E   +  Y+  L++  Q
Sbjct: 69  RLYPYSSWAKQALIMQAYAYHLGRDYEDSRAAAQRYIDFYPTEEDAAYAQYLLALSYYDQ 128

Query: 118 DRNFMHDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDL 177
                     ID   RD      A    + +++ YP+S YA  A  +     + LA  ++
Sbjct: 129 ----------IDEVGRDQGLTFQALQSLRTVIEVYPDSEYASSAILKFDLAFDHLAGKEM 178

Query: 178 ATADFYLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQ 237
               +YLR+  + +A+NR + + + +  T    ++L   +EAY  LGL +  +    ++ 
Sbjct: 179 EIGRYYLRKGHYTSAVNRFRVVVEDFQTTTHTAEALHRLVEAYLSLGLVNEAQTAGAILG 238

Query: 238 LN 239
            N
Sbjct: 239 HN 240