Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., DNA uptake lipoprotein from Marinobacter adhaerens HP15

 Score =  160 bits (405), Expect = 3e-44
 Identities = 90/234 (38%), Positives = 133/234 (56%), Gaps = 3/234 (1%)

Query: 6   LSGLLALSLLFGCSSSPDVVPDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAY 65
           LS L+ L      +   +V+P+      Y  A+ A+ SG +  A + L+AL++ YPFG Y
Sbjct: 24  LSTLVVLVSACASNKQEEVLPE---KTYYENAREAMTSGNFNEAEQNLDALETYYPFGRY 80

Query: 66  SEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDL 125
           +EQ QLDLIYA Y+N DL    A  +RF RLNP  +  D+ LYMRGL     D       
Sbjct: 81  AEQAQLDLIYARYQNLDLEGSRAAADRFLRLNPQSDHADYALYMRGLASYNLDIGLAARY 140

Query: 126 FNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLR 185
           F ID   RDP     +F DF +LL RYP+S Y  DA++RM A++NR+AE +L  A +Y++
Sbjct: 141 FPIDVAARDPGEQLQSFRDFSELLNRYPDSQYVADARQRMIAVRNRMAELELYAARYYVK 200

Query: 186 REAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           R+A++AA NR + + + YP      ++L I  E ++ L L    +    +++ N
Sbjct: 201 RQAYVAANNRARYIIENYPTATVTEEALIILAETFRFLELRKGSQDAIAMLRTN 254