Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., competence protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 78.2 bits (191), Expect = 1e-19
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 10/184 (5%)

Query: 26  PDVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLAL 85
           P+    +LY     A++   ++ A +    L   YPF  Y+ + +L L  AY+ +++   
Sbjct: 49  PEDTAQELYESGNDAMREKDYVAAAQAYTRLKDNYPFSPYTIEAELSLADAYFLDEEYPA 108

Query: 86  GLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLFNIDRRDRDPEPVKAAFADF 145
                + F  L+P H+ + +VLY  G   MA+ ++F+         DR    V+ A+  F
Sbjct: 109 AAEAYKEFETLHPRHQAIPYVLYQVG---MARLKSFI-------SVDRPVNNVQEAYQYF 158

Query: 146 KKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPD 205
           ++L + YP + YA  A+  M   +  LAE +L  AD Y R   + AA  R   ++  + D
Sbjct: 159 QRLRESYPGTEYAAKAEEHMKECRRLLAERELFIADVYWRTGKYGAAWQRYSFVRDNFKD 218

Query: 206 TEAA 209
              A
Sbjct: 219 VPHA 222