Pairwise Alignments

Query, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., competence lipoprotein ComL, putative (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 16/237 (6%)

Query: 9   LLALSL---LFGCSSSPDVVP---DVPPSQLYSEAQTALQSGTWLTAIEKLEALDSRYPF 62
           +LAL L   L  C S     P   + PP  +++ A+  LQ+     A      ++  YPF
Sbjct: 11  MLALGLAVILAACGSQQPEFPALEESPPDVIFNRAEFELQANNLDEAARYFGEVERLYPF 70

Query: 63  GAYSEQVQLDLIYAYYKNDDLALGLATIERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFM 122
             ++++  +   + Y++N +     A  +R+    P  E   +  Y+  L++  Q     
Sbjct: 71  SEFAKRALIMQAFTYHRNREYESSRAAAQRYLDFYPADEDAAYAQYLLALSYYDQ----- 125

Query: 123 HDLFNIDRRDRDPEPVKAAFADFKKLLQRYPNSPYAEDAQRRMFALKNRLAEYDLATADF 182
                ID   RD      A    + +++ YP S YA+ +  +     N LA  ++    +
Sbjct: 126 -----IDDVGRDQGLTFQALQALRTVIEVYPESSYAKSSILKFDLAFNHLAAKEMEIGRY 180

Query: 183 YLRREAWIAAINRTQELQKTYPDTEAARKSLEIQLEAYQQLGLTDAIERTKQLMQLN 239
           YL+R  + AAINR + + + +  T    ++L   +EAY  LGL    +    ++  N
Sbjct: 181 YLKRGHYAAAINRFRVVVEDFQTTTHTPEALHRLVEAYLSLGLEGEAQTAGAILGFN 237