Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., sigma 54 modulation protein / SSU ribosomal protein S30P from Synechococcus elongatus PCC 7942

 Score = 45.1 bits (105), Expect = 5e-10
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 1   MKINITGKNIEVTSAIRNHIEGKL-KKLEKWQ--VDIIGCQASFSEEPNKQKKFEAVVSI 57
           MK+ + G NI+VT+AI ++++ KL K +  +Q  +  I    S ++      +  A V+I
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLSVAKHAKSNPRQTAEVTI 60

Query: 58  PRGQLV--ASAIHEDLYAAINEVEQKLERQLNKLRHKPEARR 97
                V  A   +E+LYA+I+ V  K+ RQL K + K   R+
Sbjct: 61  YANGTVIRAEECNENLYASIDLVSDKITRQLKKYKEKLRDRK 102