Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 95 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Shewanella loihica PV-4

 Score = 62.8 bits (151), Expect = 1e-15
 Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 1  MKINITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRG 60
          M+IN+TG +IE+T ++R++IE K  KLE+    I       + E   Q+K EA + +  G
Sbjct: 1  MQINLTGHHIEITQSLRSYIEEKFTKLERHFDQINNVHVVLNVE-KLQQKVEAKLHLRGG 59

Query: 61 QLVASAIHEDLYAAINEVEQKLERQLNKLRHK 92
          ++ A++ H D+YAAI+ +  KL+RQ+ K + K
Sbjct: 60 EVFATSEHADMYAAIDSLIDKLDRQVIKHKEK 91