Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 124 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Shewanella loihica PV-4

 Score = 81.3 bits (199), Expect = 4e-21
 Identities = 46/95 (48%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 3  INITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRGQL 62
          I IT K+ EVT+ IR  IE +L+KL +  V +I       +E  +  K EA V IP   L
Sbjct: 2  IKITSKDFEVTTPIRERIESRLEKLSRHDVQLINPHVIIGQE-KQGFKIEASVGIPSNTL 60

Query: 63 VASAIHEDLYAAINEVEQKLERQLNKLRHKPEARR 97
           A A  +DLYAAIN + QKLE+QLN+L HKPE  R
Sbjct: 61 FAQAKDKDLYAAINAMGQKLEKQLNRLSHKPEGAR 95