Pairwise Alignments

Query, 108 a.a., ribosomal subunit interface protein from Vibrio cholerae E7946 ATCC 55056

Subject, 118 a.a., ribosomal subunit interface protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 43.1 bits (100), Expect = 1e-09
 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 1   MKINITGKNIEVTSAIRNHIEGKLKKLEKWQVDIIGCQASFSEEPNKQKKFEAVVSIPRG 60
           MKIN++G +++VT +++ H+  K  K+      +IG     ++E + + + E   +    
Sbjct: 1   MKINLSGHHVDVTDSVKEHVNEKFSKIATHFPTLIGLDIIIAKE-HGEFQVEIRTNYEGS 59

Query: 61  QLVASAIHEDLYAAINEVEQKLERQLNKLRHKPEARRADKTE 102
           ++ AS   E +Y AI    +KL+     L+H+    +AD  E
Sbjct: 60  RISASGTDEVMYPAIANAAKKLDA---ALKHRKGQLKADLHE 98